| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si029173m |
| Family | GT31 |
| Protein Properties | Length: 653 Molecular Weight: 71635.9 Isoelectric Point: 6.6108 |
| Chromosome | Chromosome/Scaffold: 2 Start: 6039726 End: 6044875 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 417 | 598 | 0 |
| ERMGVRKTWMSAVRKSPNMVARFFVALHGRKEVNVELKKEADFFGDIVFVPFLDNYDLVVMKTLAICEYGVNVVSAKYVMKCDDDTFVRLDSVITEIKKV PSGRSLYMGSINIQHRPLRHGKWAVTYEEWPEEVYPAYANGPGYILSSDIADFIMSEFTKQGLTLFKMEDVSMGLWVEQFNR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 653 Download |
| MEGLAAVLLL YALVVLALES PLVSAPLPGG AAAVARKLHL SAAGAVARSA PARPAKEPRP 60 AVVVAGPSAR ARGRDRLSRF ATGLDLRLLD TARSGPLRGQ IADAVAAGAR VFAELEGLDG 120 ANATALAAPS GGGGEGGGEP PPARCPQSIA LSAEELRARG RVVELPCGLA LGSHVTVAAT 180 PRAPHEERDP AIAVIRDGEA PAIVSQFMVE LQGLRAVDGE DPPRVLHFNP RLRGDWSGRP 240 VIEQNTCYRM NWGTAHRCEG WRSRPDEETV DGLVKCEKWI RDDDEHSIKS KTAWWLNRLI 300 GQKKEVNLDW PFPFVEGQLF VLTLSAGLEG YHVSVDGRHV TSFPYRTGFV LEDATGLFLN 360 GDLDVHSVVA GSLPTTHPSF APQNYLEFST VWQALPLPDE PVEIFIGILS SANHFAERMG 420 VRKTWMSAVR KSPNMVARFF VALHGRKEVN VELKKEADFF GDIVFVPFLD NYDLVVMKTL 480 AICEYGVNVV SAKYVMKCDD DTFVRLDSVI TEIKKVPSGR SLYMGSINIQ HRPLRHGKWA 540 VTYEEWPEEV YPAYANGPGY ILSSDIADFI MSEFTKQGLT LFKMEDVSMG LWVEQFNRTR 600 PVEYIHSSKF CPYGCTDDYY TAHYQSPRLM LCMWQKLLEG RPGCCNSCSS RS* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00908 | Gal-bind_lectin | 2.0e-17 | 166 | 368 | 203 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
| cd00070 | GLECT | 1.0e-19 | 162 | 369 | 208 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
| pfam00337 | Gal-bind_lectin | 1.0e-24 | 161 | 368 | 208 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| pfam01762 | Galactosyl_T | 3.0e-26 | 416 | 594 | 189 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| PLN03133 | PLN03133 | 2.0e-130 | 144 | 645 | 521 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY92235.1 | 0 | 19 | 646 | 34 | 653 | hypothetical protein OsI_13955 [Oryza sativa Indica Group] |
| GenBank | EAZ03101.1 | 0 | 39 | 646 | 62 | 673 | hypothetical protein OsI_25245 [Oryza sativa Indica Group] |
| RefSeq | NP_001051614.1 | 0 | 19 | 646 | 34 | 653 | Os03g0803900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001059116.1 | 0 | 39 | 646 | 64 | 661 | Os07g0195200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002463707.1 | 0 | 1 | 646 | 16 | 654 | hypothetical protein SORBIDRAFT_01g004630 [Sorghum bicolor] |
