| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si029205m |
| Family | CBM57 |
| Protein Properties | Length: 629 Molecular Weight: 68706 Isoelectric Point: 6.6473 |
| Chromosome | Chromosome/Scaffold: 2 Start: 41173721 End: 41179246 |
| Description | receptor like protein 4 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM57 | 213 | 372 | 3e-26 |
| GSGKSAFDEDLHGIHWGGDRFWLGLQTLSSSSDDQSISTENVIAETLIAPNFYPRSLYQSAIVGTDRQPSLSFEMDVTPNKNYSVWLHFAEIDNGVTAEE QRVFDILINGDTAFKDVDIVRMTGERFTALVLNKTVAVSGTTLKIILQPVKGTRAIINAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 629 Download |
| MRQRSPAVLL QLRLWLLAVS ALPAFLGVLA ADLSKEPFTI RISCGSFDDV RTSPTDTLWY 60 RDFGYTGGRF ANATRPSYII PPLKTLRYFP LSDGPENCYN INNVPNGHYQ VRLFFALLDN 120 PNLDSEPIFD VSVEGTLFSS LLLGWSSDDE KTFAEALVFV QDSSLSVCFH STGHGDPSIL 180 SIEVLQIDDN GYNFGPSWGK GTVLRTAKRL RCGSGKSAFD EDLHGIHWGG DRFWLGLQTL 240 SSSSDDQSIS TENVIAETLI APNFYPRSLY QSAIVGTDRQ PSLSFEMDVT PNKNYSVWLH 300 FAEIDNGVTA EEQRVFDILI NGDTAFKDVD IVRMTGERFT ALVLNKTVAV SGTTLKIILQ 360 PVKGTRAIIN AIEVFEIIAA EKKTLPQEVS TLRTLKGSLG LPLRFGWNGD PCVPQQHPWS 420 GVDCQFDNTK GNWVIDGLGL DNQGLRGVIP GDISKLQHLQ SINLSGNSIK GNIPTSVGTI 480 SALQVLDLSY NELNGSIPES LGQLTSLQIL NLNGNRLSGR VPASLGGRPL HRARFNFTDN 540 AGLCGIPGLR ECGPHLSVAA KIGMAFGVLL AILFLVNILR AQKLAAAREA PYAKSRTQFT 600 RDVQMAKHQR PSESSRSSNN ESSPHLLS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 2.0e-14 | 438 | 526 | 89 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 2.0e-14 | 438 | 525 | 88 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 8.0e-15 | 438 | 527 | 90 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam12819 | Malectin_like | 7.0e-68 | 42 | 377 | 354 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 0 | 24 | 628 | 616 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI30598.1 | 0 | 37 | 628 | 24 | 624 | unnamed protein product [Vitis vinifera] |
| GenBank | EAZ39920.1 | 0 | 21 | 627 | 19 | 591 | hypothetical protein OsJ_24359 [Oryza sativa Japonica Group] |
| RefSeq | NP_001059721.1 | 0 | 21 | 627 | 19 | 636 | Os07g0501800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002279791.1 | 0 | 40 | 628 | 1 | 600 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002462899.1 | 0 | 1 | 628 | 1 | 639 | hypothetical protein SORBIDRAFT_02g034070 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rgz_A | 0.00000000000005 | 410 | 554 | 611 | 750 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 3rgz_A | 0.000000003 | 438 | 525 | 399 | 486 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 3rgz_A | 0.000000005 | 434 | 525 | 467 | 558 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 3rgz_A | 0.00000005 | 445 | 526 | 454 | 535 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 3rgz_A | 0.00001 | 459 | 552 | 396 | 489 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
