| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si029257m |
| Family | GT5 |
| Protein Properties | Length: 608 Molecular Weight: 66546.6 Isoelectric Point: 7.148 |
| Chromosome | Chromosome/Scaffold: 2 Start: 10973964 End: 10980585 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 82 | 579 | 0 |
| IVFVATEVHPWCKTGGLGDVVGGLPPALAAMGHRVMTIAPRYDQYKDAWDTNVLVEVNVGDTVETVRFFHCYKRGVDRVFVDHPMFLEKVWGKTGAKLYG PTTGTDYRDNQLRFCLLCLAALEAPRVLNLNNSEYFSGPYGEDVVFVANDWHTAVLPCYLKNMYKANGIYANAKVAFCIHNIAYQGRFARADFDLLNLPD SFLPSFDFLDGHVKPVLGRKINWMKGGIMESDLVLTVSPHYVKELTSGPDKGVELDGVLRTKPLETGIVNGMDVYEWDPATDKYISVKYDATTVTEARAL NKERLQAEVGLPVDSSIPVIVFVGRLEEQKGSDILISAIPEFVGENVQIIVLGTGKKKMEEELTLLEVKYPNNARGIAKFNVPLAHMMFAGADFIIVPSR FEPCGLIQLQGMRYGVIPICSSTGGLVDTVKEGITGFHMGSFNVECETVDPADVTAVGLTVTRALKQYNTPAFHVMVQNCMAQDLSWKGPAKKWEEVL | |||
| Full Sequence |
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| Protein Sequence Length: 608 Download |
| MAATMGSISA YGSYQTNRPS ALKQGPHMQF QKCCGGVTFL SKRSQSTRSK THLAKRRATN 60 NGIHPKATRS RAPIVCSTGM TIVFVATEVH PWCKTGGLGD VVGGLPPALA AMGHRVMTIA 120 PRYDQYKDAW DTNVLVEVNV GDTVETVRFF HCYKRGVDRV FVDHPMFLEK VWGKTGAKLY 180 GPTTGTDYRD NQLRFCLLCL AALEAPRVLN LNNSEYFSGP YGEDVVFVAN DWHTAVLPCY 240 LKNMYKANGI YANAKVAFCI HNIAYQGRFA RADFDLLNLP DSFLPSFDFL DGHVKPVLGR 300 KINWMKGGIM ESDLVLTVSP HYVKELTSGP DKGVELDGVL RTKPLETGIV NGMDVYEWDP 360 ATDKYISVKY DATTVTEARA LNKERLQAEV GLPVDSSIPV IVFVGRLEEQ KGSDILISAI 420 PEFVGENVQI IVLGTGKKKM EEELTLLEVK YPNNARGIAK FNVPLAHMMF AGADFIIVPS 480 RFEPCGLIQL QGMRYGVIPI CSSTGGLVDT VKEGITGFHM GSFNVECETV DPADVTAVGL 540 TVTRALKQYN TPAFHVMVQN CMAQDLSWKG PAKKWEEVLL GLGVEGSQAG IEGEEIAPLA 600 KENVATP* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 5.0e-74 | 78 | 577 | 514 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 9.0e-102 | 80 | 577 | 515 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 7.0e-127 | 80 | 578 | 509 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 5.0e-159 | 82 | 579 | 511 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 3.0e-174 | 80 | 582 | 508 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG43100.1 | 0 | 1 | 607 | 1 | 609 | granule-bound starch synthase 1b [Zea mays] |
| GenBank | ACL54413.1 | 0 | 1 | 607 | 1 | 609 | unknown [Zea mays] |
| GenBank | ACY56072.1 | 0 | 1 | 607 | 1 | 608 | granule-bound starch synthase II [Oryza sativa Japonica Group] |
| RefSeq | NP_001106039.1 | 0 | 1 | 607 | 1 | 609 | granule bound starch synthase IIa precursor [Zea mays] |
| RefSeq | XP_002461889.1 | 0 | 1 | 607 | 1 | 607 | hypothetical protein SORBIDRAFT_02g009870 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 80 | 607 | 10 | 536 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 3vue_A | 0 | 80 | 607 | 10 | 536 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3guh_A | 0 | 80 | 585 | 1 | 479 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 2r4u_A | 0 | 80 | 585 | 1 | 479 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 2r4t_A | 0 | 80 | 585 | 1 | 479 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| AJ568414 | 569 | 40 | 608 | 0 |
| HO825853 | 519 | 88 | 606 | 0 |
| HO629148 | 581 | 35 | 608 | 0 |
| CX101131 | 353 | 237 | 589 | 0 |
| CX101131 | 51 | 558 | 608 | 0.0002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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