Basic Information | |
---|---|
Species | Setaria italica |
Cazyme ID | Si029287m |
Family | CE8 |
Protein Properties | Length: 599 Molecular Weight: 64668.1 Isoelectric Point: 9.4921 |
Chromosome | Chromosome/Scaffold: 2 Start: 48146641 End: 48151305 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 287 | 582 | 0 |
LVVAKDGSGNFTTVGEAVAAAPNNSESRFVIYIKAGGYFENVEVGPEKTNLMFVGDGMWKTVIKASRNVVDNSTTYRSATLAVVGTGFLARDLTVENAAG PSKHQAVALRVNADLSAFYRCSFAGYQDTLYAHSLRQFYRDCDVYGTVDFVFGDAAAVLQGCSLYARRPDPRQKNVFTAQGREDPNQNTGIVVQGGKVAA AADLIPVLANFTSYLGRPWKLYSRTVFIQTKMEELIHPRGWLEWNGSFALDTLYYAEYMNRGPGANTSARVDWPGYHVLTNATDATNFTVLNFIQG |
Full Sequence |
---|
Protein Sequence Length: 599 Download |
MAPPTVRPKL RPAAAKLPLT ATVLSLALLL LPLGFVATHR AFSGGVAVST SATGDERHRE 60 ERVLLAGNKD DGNADAAAAA EHAAAVDRHC AGTLHREVCA STLASIPNLA RKPLRDVISD 120 VVARAAAAVR ASSSNCSSYL RRPRGLRVRD RLALSDCLEL FGRTLGQLGT AADELSAGNR 180 TAEESIAGVQ TVLSAALTNQ YTCLEGFAGP SASEDGRVRP YIQGRIYHVA HLVSNSLAML 240 RRLPQRRRRR GREALEGYGR VRRGFPSWVS AGDRRRLLEP SAGAADLVVA KDGSGNFTTV 300 GEAVAAAPNN SESRFVIYIK AGGYFENVEV GPEKTNLMFV GDGMWKTVIK ASRNVVDNST 360 TYRSATLAVV GTGFLARDLT VENAAGPSKH QAVALRVNAD LSAFYRCSFA GYQDTLYAHS 420 LRQFYRDCDV YGTVDFVFGD AAAVLQGCSL YARRPDPRQK NVFTAQGRED PNQNTGIVVQ 480 GGKVAAAADL IPVLANFTSY LGRPWKLYSR TVFIQTKMEE LIHPRGWLEW NGSFALDTLY 540 YAEYMNRGPG ANTSARVDWP GYHVLTNATD ATNFTVLNFI QGDLWLNSTA FPYTLGLS* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 1.0e-168 | 153 | 598 | 451 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 1.0e-172 | 153 | 597 | 458 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02933 | PLN02933 | 2.0e-175 | 153 | 597 | 451 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 9.0e-176 | 153 | 597 | 450 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 286 | 583 | 298 | + Pectinesterase. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACQ85264.1 | 0 | 89 | 598 | 58 | 565 | pectin methylesterase [Musa acuminata AAA Group] |
GenBank | EEC82670.1 | 0 | 39 | 598 | 34 | 579 | hypothetical protein OsI_27314 [Oryza sativa Indica Group] |
RefSeq | NP_001060620.1 | 0 | 39 | 598 | 34 | 579 | Os07g0675100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002455538.1 | 0 | 89 | 597 | 48 | 576 | hypothetical protein SORBIDRAFT_03g012830 [Sorghum bicolor] |
RefSeq | XP_002463382.1 | 0 | 34 | 598 | 34 | 599 | hypothetical protein SORBIDRAFT_02g042780 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 279 | 597 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 285 | 597 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 8e-24 | 288 | 554 | 7 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 8e-24 | 288 | 554 | 7 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 8e-24 | 288 | 554 | 7 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |