Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si029448m |
Family | CBM43 |
Protein Properties | Length: 536 Molecular Weight: 56216.6 Isoelectric Point: 5.0567 |
Chromosome | Chromosome/Scaffold: 2 Start: 41511078 End: 41516216 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 389 | 470 | 7.1e-33 |
CVAADDADEKAVQAAMDWACGPGRADCTAIQPGQGCYLPNDVRSHASYAFDAYYQSQGRAAGSCYFQGAGMVTTTDPSHDNC | |||
GH17 | 39 | 370 | 0 |
VGVTIGTAVTNLLSPSDLADFLRAQHITRVRLYDADPRLLSALASSGARAIVGVPNDELLALGSSPATATAWVARRVLPFAGVNSSTPNVISAIAVGDEV PTALPSALPVLLPAIRSLAAALAAANLSSIPVSTPLPFSVVLDPFPPSQAFFNQSLAKSFIAPLLGHLANTSAPLMLNLYPYYSLMQSGGVIPLDNALFR PLPPSQEMVDPNTLLHYTNVFDAMLDAVRVAVRNLNVTAGGGVPILVTETGWPSYGDRRAEPYATRDNADAYNSNLIKHVLEDKPGTPMAPGAAAQSSAY IYELFNEDLRPGPVSEANWGLFYGNGTPVYLL |
Full Sequence |
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Protein Sequence Length: 536 Download |
MGSRSRGGSG SGLLIPFLLL SLHCSPVLVS AAGSGEPYVG VTIGTAVTNL LSPSDLADFL 60 RAQHITRVRL YDADPRLLSA LASSGARAIV GVPNDELLAL GSSPATATAW VARRVLPFAG 120 VNSSTPNVIS AIAVGDEVPT ALPSALPVLL PAIRSLAAAL AAANLSSIPV STPLPFSVVL 180 DPFPPSQAFF NQSLAKSFIA PLLGHLANTS APLMLNLYPY YSLMQSGGVI PLDNALFRPL 240 PPSQEMVDPN TLLHYTNVFD AMLDAVRVAV RNLNVTAGGG VPILVTETGW PSYGDRRAEP 300 YATRDNADAY NSNLIKHVLE DKPGTPMAPG AAAQSSAYIY ELFNEDLRPG PVSEANWGLF 360 YGNGTPVYLL HVSGAGGFLG NDTTDRSFCV AADDADEKAV QAAMDWACGP GRADCTAIQP 420 GQGCYLPNDV RSHASYAFDA YYQSQGRAAG SCYFQGAGMV TTTDPSHDNC LFPGSKLLSN 480 DTKSGSANNT TTSTSDAEGS AIWRLRTGRE KGFLLFLRLL LSIAVVIVTD SNFWT* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 6.0e-7 | 246 | 363 | 120 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-25 | 387 | 459 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-42 | 387 | 472 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-61 | 39 | 368 | 330 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC83956.1 | 0 | 36 | 472 | 42 | 480 | putative beta-1,3-glucanase [Oryza sativa Japonica Group] |
GenBank | EEC82125.1 | 0 | 36 | 535 | 40 | 538 | hypothetical protein OsI_26155 [Oryza sativa Indica Group] |
RefSeq | NP_001059752.1 | 0 | 36 | 535 | 42 | 540 | Os07g0510200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001152289.1 | 0 | 25 | 535 | 34 | 544 | glucan endo-1,3-beta-glucosidase 3 [Zea mays] |
RefSeq | XP_002518468.1 | 0 | 35 | 527 | 46 | 528 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 39 | 370 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 1.4013e-45 | 39 | 371 | 1 | 305 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 1.4013e-45 | 39 | 371 | 1 | 305 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 7.00649e-45 | 39 | 373 | 3 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 7.00649e-45 | 39 | 373 | 3 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |