| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si029583m |
| Family | GT1 |
| Protein Properties | Length: 502 Molecular Weight: 55370.1 Isoelectric Point: 7.019 |
| Chromosome | Chromosome/Scaffold: 2 Start: 11249216 End: 11255245 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT1 | 57 | 464 | 0 |
| IVGTRGDVQPFIAIGKRLQDYGHRVRLATHANFKDFVMTTGLEFYPLGGDPKVLAGYMVKNKGFLPATPSEIPIQRKQIRDIIFSLLPACKDPDIDTGVS FSADAIIANPAAYGHVHVAEALNIPIHIIFTMPWTPTCEFPHPFSRVKQSAGYRLSYQIVDSFVWLGIRDMINDLRKRKLKLRPVTYLSGTHAYSNDIPH AYIWSPYLVPKPKDWGPKIDVVGFCFLDLASNYEPPEPLLRWLESGDKPIYIGFGSLPIPEPDKLTKIIVEALEITGQRGIINKGWGGLGNLEESKEFVY VLDNVPHDWLFLQCKAVVHHGGAGTTAAGLKAACPTTIIPFFGDQFFWGSMVHARGLGAPPVPVEQLQLHSLVDAIKFMIDPKVKERAVELAKAIESEDG VDGAVKSF | |||
| Full Sequence |
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| Protein Sequence Length: 502 Download |
| MATLKDDGTV VVDIPTNLEA ASLDLPSENH HNVAFGGEPL DSSDLQHRPP MQIVMLIVGT 60 RGDVQPFIAI GKRLQDYGHR VRLATHANFK DFVMTTGLEF YPLGGDPKVL AGYMVKNKGF 120 LPATPSEIPI QRKQIRDIIF SLLPACKDPD IDTGVSFSAD AIIANPAAYG HVHVAEALNI 180 PIHIIFTMPW TPTCEFPHPF SRVKQSAGYR LSYQIVDSFV WLGIRDMIND LRKRKLKLRP 240 VTYLSGTHAY SNDIPHAYIW SPYLVPKPKD WGPKIDVVGF CFLDLASNYE PPEPLLRWLE 300 SGDKPIYIGF GSLPIPEPDK LTKIIVEALE ITGQRGIINK GWGGLGNLEE SKEFVYVLDN 360 VPHDWLFLQC KAVVHHGGAG TTAAGLKAAC PTTIIPFFGD QFFWGSMVHA RGLGAPPVPV 420 EQLQLHSLVD AIKFMIDPKV KERAVELAKA IESEDGVDGA VKSFLKHLPR QRNSETVPTA 480 PPSTFMHPFL LPVKRCFGIA S* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1819 | COG1819 | 2.0e-32 | 50 | 476 | 437 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| pfam03033 | Glyco_transf_28 | 4.0e-36 | 53 | 197 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| cd03784 | GT1_Gtf_like | 2.0e-116 | 51 | 467 | 421 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC15827.1 | 0 | 1 | 501 | 112 | 617 | putative UDP-glucose:sterol glucosyltransferase [Oryza sativa Japonica Group] |
| DDBJ | BAH01184.1 | 0 | 1 | 501 | 79 | 580 | unnamed protein product [Oryza sativa Japonica Group] |
| RefSeq | NP_001052094.1 | 0 | 1 | 500 | 113 | 609 | Os04g0131900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001059477.1 | 0 | 1 | 493 | 79 | 586 | Os07g0419500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002461897.1 | 0 | 1 | 501 | 46 | 557 | hypothetical protein SORBIDRAFT_02g010030 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 6e-33 | 51 | 480 | 1 | 391 | A Chain A, The Structure Of Soybean Peroxidase |
| PDB | 3h4i_A | 6e-33 | 51 | 480 | 1 | 391 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1iir_A | 4e-24 | 51 | 472 | 1 | 402 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| PDB | 1rrv_B | 8e-21 | 51 | 451 | 1 | 383 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1rrv_A | 8e-21 | 51 | 451 | 1 | 383 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GT046352 | 335 | 60 | 394 | 0 |
| GO883166 | 336 | 11 | 346 | 0 |
| FL915783 | 244 | 50 | 293 | 0 |
| FL785638 | 270 | 181 | 450 | 0 |
| GT046352 | 32 | 387 | 418 | 0.071 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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