Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si029615m |
Family | GT47 |
Protein Properties | Length: 495 Molecular Weight: 55015.4 Isoelectric Point: 9.7395 |
Chromosome | Chromosome/Scaffold: 2 Start: 43521094 End: 43524552 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 104 | 423 | 0 |
VKIYMYDLPPKFTYGVVRSYMAARAPSGSADAAAVLPDEQLRYPGHQHSAEWWLFKDLLRRGPRDRPVARVDEPSNADLFYVPFFSSLSLVVNPIRPPAA ANASGVAAAYSDEAMQEELLAWLELQPYWQQHRGRDHIFICQDPNALYKVIDRISNAVLLVSDFGRLRSDQASLVKDVILPYSHRINSFKGDVGVDGRPS LLFFMGNRYRKEGGKVRDALFQILEKEEDVTIKHGAQSRESRRAATRGMHSSKFCLHPAGDTPSACRLFDALVSLCIPVIVSDHIELPFEDVIDYSNIAI FVETSKAVQPGYLTSMLRRV |
Full Sequence |
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Protein Sequence Length: 495 Download |
MWERGRPPRK PRPSPIIVPP PPPSPPPRLN LLLPRSLLAL AARAMPSRRP SPVLLLLLAL 60 ALALLFVILS PSSPSASRLS RSLASGSASA SSSPATPAAP PPPVKIYMYD LPPKFTYGVV 120 RSYMAARAPS GSADAAAVLP DEQLRYPGHQ HSAEWWLFKD LLRRGPRDRP VARVDEPSNA 180 DLFYVPFFSS LSLVVNPIRP PAAANASGVA AAYSDEAMQE ELLAWLELQP YWQQHRGRDH 240 IFICQDPNAL YKVIDRISNA VLLVSDFGRL RSDQASLVKD VILPYSHRIN SFKGDVGVDG 300 RPSLLFFMGN RYRKEGGKVR DALFQILEKE EDVTIKHGAQ SRESRRAATR GMHSSKFCLH 360 PAGDTPSACR LFDALVSLCI PVIVSDHIEL PFEDVIDYSN IAIFVETSKA VQPGYLTSML 420 RRVSSERILE YQREIKKVKQ FFEYEDPNGP VNEIWRQVSL KAPLIKLLTN RNKRLFERGT 480 NGTDCSCMCS TTPY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-65 | 104 | 423 | 331 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG27631.1 | 0 | 104 | 493 | 60 | 449 | exostosin-like [Zea mays] |
GenBank | ACN31783.1 | 0 | 104 | 493 | 104 | 493 | unknown [Zea mays] |
GenBank | EEE67431.1 | 0 | 1 | 492 | 1 | 494 | hypothetical protein OsJ_24780 [Oryza sativa Japonica Group] |
RefSeq | NP_001060019.1 | 0 | 1 | 492 | 1 | 494 | Os07g0567000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002460871.1 | 0 | 43 | 493 | 43 | 493 | hypothetical protein SORBIDRAFT_02g036640 [Sorghum bicolor] |