| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si029833m |
| Family | GT31 |
| Protein Properties | Length: 448 Molecular Weight: 51610.9 Isoelectric Point: 7.9953 |
| Chromosome | Chromosome/Scaffold: 2 Start: 6021769 End: 6025343 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 215 | 397 | 0 |
| ERMAVRKSWMMYTRKSSNVVARFFVALNGKKEVNAELKKEAEFFRDIVIVPFVDSYDLVVLKTVAIAEYGVRVVPAKYVMKCDDDTFVRIDSVLDQVKKA RSDRSVYVGSINYFHRPLRSGKWAVTYEEWPEEVYPNYANGPGYVISSDIARYIVSEFDNQTLRLFKMEDVSMGMWVEKFNNT | |||
| Full Sequence |
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| Protein Sequence Length: 448 Download |
| MVSQFMVELV GTKAVDGEAP PRILHFNPRI RGDYSRRPVI EMNSCYRMQW GQSQRCEGFA 60 SRPAEDTVDG QLKCEKWIRD DDNKSEESKM KWWVKRLIGR PKDVHISWPY PFAEGKLFVM 120 TLTAGLEGYH VNVDGRHVAS FPYRTGYSLE DATALSLNGD IDIESIFASS LPNSHPSFAP 180 ERYLEMSEQW RAPPLPTEPV ELFIGILSAA SHFAERMAVR KSWMMYTRKS SNVVARFFVA 240 LNGKKEVNAE LKKEAEFFRD IVIVPFVDSY DLVVLKTVAI AEYGVRVVPA KYVMKCDDDT 300 FVRIDSVLDQ VKKARSDRSV YVGSINYFHR PLRSGKWAVT YEEWPEEVYP NYANGPGYVI 360 SSDIARYIVS EFDNQTLRLF KMEDVSMGMW VEKFNNTRRP VEIRHDVRFY QSGCYNGYFT 420 AHYQSPQHMI CLWRKLQSGS AQCCNVR* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00908 | Gal-bind_lectin | 7.0e-15 | 4 | 166 | 163 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
| cd00070 | GLECT | 9.0e-18 | 3 | 167 | 165 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
| pfam00337 | Gal-bind_lectin | 1.0e-20 | 3 | 166 | 164 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| pfam01762 | Galactosyl_T | 9.0e-26 | 214 | 393 | 193 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| PLN03133 | PLN03133 | 8.0e-120 | 1 | 447 | 458 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN34354.1 | 0 | 1 | 447 | 215 | 661 | unknown [Zea mays] |
| DDBJ | BAC83183.1 | 0 | 1 | 447 | 209 | 655 | galactosyltransferase family-like protein [Oryza sativa Japonica Group] |
| DDBJ | BAD73665.1 | 0 | 1 | 447 | 1 | 447 | galactosyltransferase-like [Oryza sativa Japonica Group] |
| RefSeq | NP_001146977.1 | 0 | 1 | 447 | 217 | 663 | LOC100280586 [Zea mays] |
| RefSeq | XP_002461635.1 | 0 | 1 | 447 | 219 | 665 | hypothetical protein SORBIDRAFT_02g005780 [Sorghum bicolor] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FL919952 | 245 | 1 | 245 | 0 |
| CD440281 | 245 | 13 | 257 | 0 |
| GD027359 | 234 | 21 | 254 | 0 |
| DY971105 | 290 | 108 | 396 | 0 |
| HO799491 | 317 | 26 | 341 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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