Basic Information | |
---|---|
Species | Setaria italica |
Cazyme ID | Si029907m |
Family | GH27 |
Protein Properties | Length: 432 Molecular Weight: 47557.2 Isoelectric Point: 6.5113 |
Chromosome | Chromosome/Scaffold: 2 Start: 48314801 End: 48319339 |
Description | Melibiase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH27 | 250 | 356 | 2.8e-28 |
SMTDIADKNNKWASYAGPGGWNDPDMLEVGNGGMTFAEYHSHFSIWALMKAPLLIGCDVRNLTSETLEILSNKEVIQVNQDPLGVQGRRILGEGKYGCRE VWAGPLS | |||
GH27 | 50 | 161 | 9.4e-34 |
YDTSNYGKLQLNNGLALTPQMGWNSWNFFACNINETVIRETADALVSTGLAELGYNYVNIDDCWSNVKRGKKDQLLPDPKTFPSGIKALADYVHGKGLKL GIYSDAGKFTCQ | |||
GH27 | 152 | 259 | 6.2e-34 |
YSDAGKFTCQVRPGSLYHENDDAMLFASWGVDYLKYDNCYNLGIKPQKRYPPMRDALNSTGRQIFYSLCEWGEYDPALWAGKVGNSWRTTGDITDTWKSM TDIADKNN |
Full Sequence |
---|
Protein Sequence Length: 432 Download |
MEPVARLPLP LLTVSALLLL LSPPPPAADA RVPPPPRIQP LATATLRRLY DTSNYGKLQL 60 NNGLALTPQM GWNSWNFFAC NINETVIRET ADALVSTGLA ELGYNYVNID DCWSNVKRGK 120 KDQLLPDPKT FPSGIKALAD YVHGKGLKLG IYSDAGKFTC QVRPGSLYHE NDDAMLFASW 180 GVDYLKYDNC YNLGIKPQKR YPPMRDALNS TGRQIFYSLC EWGEYDPALW AGKVGNSWRT 240 TGDITDTWKS MTDIADKNNK WASYAGPGGW NDPDMLEVGN GGMTFAEYHS HFSIWALMKA 300 PLLIGCDVRN LTSETLEILS NKEVIQVNQD PLGVQGRRIL GEGKYGCREV WAGPLSGNRL 360 AVALWNRCSE AANITMKLPA VGLDGSAAYS VRDLWKHETL SENVIGTFGA QVEVHDTKMY 420 IFSPAVSVAS I* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02065 | Melibiase | 7.0e-29 | 66 | 305 | 308 | + Melibiase. | ||
PLN03231 | PLN03231 | 6.0e-29 | 68 | 333 | 352 | + putative alpha-galactosidase; Provisional | ||
PLN02692 | PLN02692 | 1.0e-174 | 60 | 424 | 366 | + alpha-galactosidase | ||
PLN02229 | PLN02229 | 0 | 37 | 431 | 395 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 0 | 60 | 424 | 366 | + alpha-galactosidase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC82687.1 | 0 | 37 | 430 | 33 | 426 | hypothetical protein OsI_27343 [Oryza sativa Indica Group] |
RefSeq | NP_001060639.1 | 0 | 37 | 430 | 31 | 424 | Os07g0679300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130661.1 | 0 | 23 | 431 | 21 | 425 | hypothetical protein LOC100191764 [Zea mays] |
RefSeq | XP_002279730.1 | 0 | 17 | 424 | 10 | 419 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002461216.1 | 0 | 1 | 431 | 1 | 431 | hypothetical protein SORBIDRAFT_02g042960 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 60 | 424 | 1 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 0 | 61 | 422 | 2 | 390 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 0 | 60 | 401 | 1 | 362 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 0 | 60 | 401 | 1 | 362 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3lrl_A | 0 | 62 | 399 | 24 | 401 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
melibiose degradation | ALPHAGALACTOSID-RXN | EC-3.2.1.22 | α-galactosidase |
stachyose degradation | RXN-11501 | EC-3.2.1.22 | α-galactosidase |