| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si030026m |
| Family | GH33 |
| Protein Properties | Length: 408 Molecular Weight: 45380 Isoelectric Point: 8.3122 |
| Chromosome | Chromosome/Scaffold: 2 Start: 41764933 End: 41767821 |
| Description | BNR/Asp-box repeat family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH33 | 97 | 394 | 3.1e-25 |
| FTFPAGSAPFNSCHASTIVQIDEGNFLVAYFGGSMEGAPDVKIWLQRYSGGHWHPPVVADEQFGVPMWNPVLFQLPSRELLLFYKIGQEVQKWSGAMKRS LDGGITWLPREQLPPGILGPIKNKPFLLEDGRLLCGSSVESWNSWGAWLEVTKDAGRTWRKYGPIYVDGQPLGVIQPVPYRTANGIIRVLLRSFQTIGRV CMADSFDGGVTWSFVRGTELPNPNSGIDGVKMKDGRVVLGYNTFSRGTLKLAVSLNDGDSWNEVMTLEDTSGMEFSYPAVIQTMDGLIHVTYTYNRTQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 408 Download |
| MLTIHSTNKL QLVWNVISCV LLFYAFFTSD SPHKIHLSKK PFNFTISASR LLHEIGVNSG 60 LLEEKVDTRQ RLAENTHSIT NITANARSGW SIVNEEFTFP AGSAPFNSCH ASTIVQIDEG 120 NFLVAYFGGS MEGAPDVKIW LQRYSGGHWH PPVVADEQFG VPMWNPVLFQ LPSRELLLFY 180 KIGQEVQKWS GAMKRSLDGG ITWLPREQLP PGILGPIKNK PFLLEDGRLL CGSSVESWNS 240 WGAWLEVTKD AGRTWRKYGP IYVDGQPLGV IQPVPYRTAN GIIRVLLRSF QTIGRVCMAD 300 SFDGGVTWSF VRGTELPNPN SGIDGVKMKD GRVVLGYNTF SRGTLKLAVS LNDGDSWNEV 360 MTLEDTSGME FSYPAVIQTM DGLIHVTYTY NRTQIKHVVI KPSALVK* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4692 | COG4692 | 2.0e-30 | 105 | 402 | 350 | + Predicted neuraminidase (sialidase) [Carbohydrate transport and metabolism] | ||
| pfam13088 | BNR_2 | 1.0e-91 | 120 | 386 | 282 | + BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC82140.1 | 0 | 1 | 396 | 1 | 412 | hypothetical protein OsI_26191 [Oryza sativa Indica Group] |
| GenBank | EEC82140.1 | 0 | 116 | 405 | 421 | 684 | hypothetical protein OsI_26191 [Oryza sativa Indica Group] |
| GenBank | EEE67268.1 | 0 | 1 | 396 | 501 | 912 | hypothetical protein OsJ_24447 [Oryza sativa Japonica Group] |
| RefSeq | NP_001059779.1 | 0 | 1 | 407 | 1 | 423 | Os07g0516000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002460769.1 | 0 | 1 | 407 | 1 | 411 | hypothetical protein SORBIDRAFT_02g034675 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jkb_A | 0.002 | 192 | 328 | 449 | 575 | A Chain A, Crystal Structure Of Streptococcus Pneumoniae Nanb In Complex With 2,7-Anhydro-Neu5ac |
| PDB | 4fq4_A | 0.002 | 192 | 328 | 460 | 586 | A Chain A, Crystal Structure Of Streptococcus Pneumoniae Nanb In Complex With 2,7-Anhydro-Neu5ac |
| PDB | 4fpy_A | 0.002 | 192 | 328 | 460 | 586 | A Chain A, Crystal Structure Of Streptococcus Pneumoniae Nanb In Complex With 2,7-Anhydro-Neu5ac |
| PDB | 4fpo_B | 0.002 | 192 | 328 | 460 | 586 | A Chain A, Crystal Structure Of Streptococcus Pneumoniae Nanb In Complex With 2,7-Anhydro-Neu5ac |
| PDB | 4fpl_A | 0.002 | 192 | 328 | 460 | 586 | A Chain A, Crystal Structure Of Streptococcus Pneumoniae Nanb In Complex With 2,7-Anhydro-Neu5ac |
