Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si030973m |
Family | CBM43 |
Protein Properties | Length: 239 Molecular Weight: 24573.6 Isoelectric Point: 6.7526 |
Chromosome | Chromosome/Scaffold: 2 Start: 46445768 End: 46448441 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 81 | 162 | 2e-31 |
CVASQGADPAALQAGLNWACGPGHADCTAIQLGGPCYKQNNLQALASYAYNDYYQRSAKTSTACDFNGTATTTTTDPSSGQC |
Full Sequence |
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Protein Sequence Length: 239 Download |
MHWHCHRSRW LPRILSVGQW NSKMLDKTLH GCLLLLVVLL ANASGSHAET TVDSEQALAP 60 ALPDSDEGKR RSLATGGGMF CVASQGADPA ALQAGLNWAC GPGHADCTAI QLGGPCYKQN 120 NLQALASYAY NDYYQRSAKT STACDFNGTA TTTTTDPSSG QCVFTGSSMA GGGTPTASAP 180 SGLSPFTPGT GGFGNGSSSF GSPTGGLVPF DGAESLLSGA RWAVCVLLLA LPLFFFFL* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 5.0e-16 | 81 | 148 | 73 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-30 | 80 | 164 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC82508.1 | 0 | 13 | 238 | 22 | 249 | hypothetical protein OsI_26988 [Oryza sativa Indica Group] |
GenBank | EEE67655.1 | 0 | 1 | 235 | 25 | 261 | hypothetical protein OsJ_25253 [Oryza sativa Japonica Group] |
RefSeq | NP_001060371.1 | 0 | 24 | 235 | 1 | 214 | Os07g0633100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001150091.1 | 0 | 14 | 225 | 3 | 199 | LOC100283720 [Zea mays] |
RefSeq | XP_002463238.1 | 0 | 14 | 225 | 1 | 195 | hypothetical protein SORBIDRAFT_02g040340 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.000000000000007 | 78 | 164 | 11 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |