y
Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si031096m |
Family | AA6 |
Protein Properties | Length: 212 Molecular Weight: 21805.8 Isoelectric Point: 6.1462 |
Chromosome | Chromosome/Scaffold: 2 Start: 8866 End: 9722 |
Description | flavodoxin-like quinone reductase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA6 | 4 | 200 | 0 |
KIYIVYYSTWGHVATLAEEIKKGAESVDGVEATVWRVPETLPEEVLGKMHAAPVREEHPVMVAAGQLAEADGLLLGFPTRFGMMAAQMKAFLDSTGGLWQ AQALAGKPAGLFFATGTQGGGQETTALTAVTQLAHHGMLFVPIGATFGAGMFGMDEVRGGSPYGAGTFAGADGSRTPSDTELAMAQHQGKHLATIAK |
Full Sequence |
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Protein Sequence Length: 212 Download |
MATKIYIVYY STWGHVATLA EEIKKGAESV DGVEATVWRV PETLPEEVLG KMHAAPVREE 60 HPVMVAAGQL AEADGLLLGF PTRFGMMAAQ MKAFLDSTGG LWQAQALAGK PAGLFFATGT 120 QGGGQETTAL TAVTQLAHHG MLFVPIGATF GAGMFGMDEV RGGSPYGAGT FAGADGSRTP 180 SDTELAMAQH QGKHLATIAK NLKAGASAAA N* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03358 | FMN_red | 2.0e-8 | 17 | 111 | 95 | + NADPH-dependent FMN reductase. | ||
pfam00258 | Flavodoxin_1 | 2.0e-9 | 7 | 110 | 115 | + Flavodoxin. | ||
COG0655 | WrbA | 5.0e-31 | 1 | 196 | 204 | + Multimeric flavodoxin WrbA [General function prediction only] | ||
TIGR01755 | flav_wrbA | 6.0e-55 | 3 | 198 | 196 | + NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR are not detected [Energy metabolism, Electron transport]. | ||
PRK03767 | PRK03767 | 1.0e-67 | 3 | 198 | 201 | + NAD(P)H:quinone oxidoreductase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0010181 | FMN binding |
GO:0016491 | oxidoreductase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK94567.1 | 0 | 1 | 206 | 1 | 203 | unknown [Populus trichocarpa] |
RefSeq | NP_001146036.1 | 0 | 3 | 210 | 5 | 212 | hypothetical protein LOC100279567 [Zea mays] |
RefSeq | XP_002319258.1 | 0 | 1 | 206 | 1 | 203 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002461308.1 | 0 | 1 | 205 | 1 | 204 | hypothetical protein SORBIDRAFT_02g000630 [Sorghum bicolor] |
RefSeq | XP_002461673.1 | 0 | 3 | 210 | 8 | 216 | hypothetical protein SORBIDRAFT_02g006210 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4dy4_C | 0 | 4 | 203 | 2 | 196 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 4dy4_A | 0 | 4 | 203 | 2 | 196 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3b6m_B | 0 | 4 | 203 | 3 | 197 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3b6m_A | 0 | 4 | 203 | 3 | 197 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3b6k_B | 0 | 4 | 203 | 3 | 197 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HX167661 | 198 | 1 | 198 | 0 |
FL898661 | 194 | 2 | 195 | 0 |
FL950595 | 194 | 2 | 195 | 0 |
HX195037 | 198 | 1 | 198 | 0 |
FF364398 | 198 | 1 | 198 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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