Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si031201m |
Family | CBM43 |
Protein Properties | Length: 190 Molecular Weight: 18356.5 Isoelectric Point: 5.5082 |
Chromosome | Chromosome/Scaffold: 2 Start: 45041654 End: 45045033 |
Description | plasmodesmata callose-binding protein 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 21 | 103 | 1.6e-32 |
WCVCKQDAPQASMQKTIDYACGSGADCNSIHENGGCYNPNTVAAHCSWAANSYYQNNKAKGATCDFTGTATLTTSDPSSSGCS |
Full Sequence |
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Protein Sequence Length: 190 Download |
MKALVVAVVL LLSSSLVASQ WCVCKQDAPQ ASMQKTIDYA CGSGADCNSI HENGGCYNPN 60 TVAAHCSWAA NSYYQNNKAK GATCDFTGTA TLTTSDPSSS GCSYPTSASA VGTMTPTTGG 120 TMGGTPGTFT PGAGTTSTGM GTGTTTGTTG AGLGLGPAGT GMDTAAASLL PSAGVAAVLT 180 VLLSAIAFA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 8.0e-19 | 20 | 91 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-33 | 20 | 104 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF83296.1 | 0 | 20 | 114 | 20 | 114 | unknown [Zea mays] |
GenBank | ACG46419.1 | 0 | 20 | 114 | 20 | 114 | glucan endo-1,3-beta-glucosidase 3 precursor [Zea mays] |
GenBank | EAZ04609.1 | 0 | 4 | 189 | 2 | 191 | hypothetical protein OsI_26758 [Oryza sativa Indica Group] |
RefSeq | NP_001148400.1 | 0 | 20 | 114 | 20 | 114 | glucan endo-1,3-beta-glucosidase 3 [Zea mays] |
RefSeq | XP_002460971.1 | 0 | 1 | 110 | 1 | 110 | hypothetical protein SORBIDRAFT_02g038510 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 1e-17 | 18 | 106 | 10 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |