| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si032143m |
| Family | CE8 |
| Protein Properties | Length: 305 Molecular Weight: 33216.8 Isoelectric Point: 8.3394 |
| Chromosome | Chromosome/Scaffold: 2 Start: 36490827 End: 36492566 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 200 | 289 | 5.1e-21 |
| CTVAADEDLAAHAAKGTVQTYLGRPWKPFSRVVFMQSTISDVPPDTLYYAEYKNGGPGAAVSGRVNWRGVHANLDASTARSFTVEKLING | |||
| CE8 | 17 | 200 | 9.94922e-44 |
| NYTTRHVIHIKRGVYKEFVVLGQEKRNVVLVGDGMDATVISGSRCCAGERGVGETRENAACSSLLQFQFGPDSFSFCFALCCMFKFTWAVVLKKVYMGRD PPFRVQGKGFIARDLCIENTAGPRKEKGQAVALLSRSDQSVLYRCALRGYQDTLWCARSSKQLSRECTITGTVDFIFGEAAAFC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 305 Download |
| MANQHDDVVV AADGSGNYTT RHVIHIKRGV YKEFVVLGQE KRNVVLVGDG MDATVISGSR 60 CCAGERGVGE TRENAACSSL LQFQFGPDSF SFCFALCCMF KFTWAVVLKK VYMGRDPPFR 120 VQGKGFIARD LCIENTAGPR KEKGQAVALL SRSDQSVLYR CALRGYQDTL WCARSSKQLS 180 RECTITGTVD FIFGEAAAFC TVAADEDLAA HAAKGTVQTY LGRPWKPFSR VVFMQSTISD 240 VPPDTLYYAE YKNGGPGAAV SGRVNWRGVH ANLDASTARS FTVEKLINGN DWLPSTGVEY 300 KPGL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02506 | PLN02506 | 5.0e-72 | 5 | 304 | 353 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 8.0e-75 | 7 | 300 | 352 | + pectinesterase | ||
| PLN02301 | PLN02301 | 4.0e-75 | 7 | 304 | 360 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02201 | PLN02201 | 2.0e-82 | 7 | 304 | 360 | + probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 7.0e-94 | 7 | 290 | 346 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ07184.1 | 0 | 7 | 304 | 234 | 558 | hypothetical protein OsI_29430 [Oryza sativa Indica Group] |
| RefSeq | NP_001061940.1 | 0 | 7 | 304 | 234 | 555 | Os08g0450100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001147569.1 | 0 | 7 | 304 | 233 | 557 | pectinesterase PPE8B [Zea mays] |
| RefSeq | NP_189913.3 | 0 | 7 | 304 | 214 | 525 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002462596.1 | 0 | 21 | 304 | 35 | 319 | hypothetical protein SORBIDRAFT_02g028740 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 7 | 304 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 7 | 304 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 3uw0_A | 0.00000007 | 20 | 194 | 59 | 206 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 0.00004 | 121 | 224 | 93 | 210 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 0.00004 | 121 | 224 | 93 | 210 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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