| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si032614m |
| Family | CE8 |
| Protein Properties | Length: 566 Molecular Weight: 61497.5 Isoelectric Point: 5.7658 |
| Chromosome | Chromosome/Scaffold: 2 Start: 48971602 End: 48973299 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 243 | 540 | 0 |
| NVTVAADGSGDVKTIKEALDKVPPKNAAMYVVYVKAGTYKEYVSVARPQTNVAFIGDGADKTIITGNKNFKMNLTTKDTATMEAIGNGFFMKGVRVENTA GAENHQAVALRVQSDQAVFYQCTFDGYQDTLYTHAQRQFFRDCTVTGTIDFIFGNSQVVLQNCLIQPRKPMDNQANIITAQGRRDKRSVGGTVLHNCTIE PHPDFKADAGGKIPTYLARPWKEYSRTLYIQNDIGGFIDPKGWLEWNGDFGLQTLFYAEVDNRGAGADMSKRAKWGGIKTVTYEEAQKEFTVETFIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 566 Download |
| MSKGAIIGAS TVLVVAVVAA VCVVSFKGNS SSKGEGDDNL SMSVKSVKAF CQPTDYQQTC 60 EAELSKAAGN ASSPTELAKV IFGVTSDKIH KAISESATLT ELKNDKRTSG ALQNCKEMLE 120 YAIDDLKSSF DKLGGFEMTN FKKAVDDLKT WLSAALTYQD TCLDGFMNAT TTEASAKMQN 180 ALNASQELTE DILAVVDQFS DTLGGLSIGR RLLGDDGAPA WMPDAASRHL LEASPESPEF 240 KPNVTVAADG SGDVKTIKEA LDKVPPKNAA MYVVYVKAGT YKEYVSVARP QTNVAFIGDG 300 ADKTIITGNK NFKMNLTTKD TATMEAIGNG FFMKGVRVEN TAGAENHQAV ALRVQSDQAV 360 FYQCTFDGYQ DTLYTHAQRQ FFRDCTVTGT IDFIFGNSQV VLQNCLIQPR KPMDNQANII 420 TAQGRRDKRS VGGTVLHNCT IEPHPDFKAD AGGKIPTYLA RPWKEYSRTL YIQNDIGGFI 480 DPKGWLEWNG DFGLQTLFYA EVDNRGAGAD MSKRAKWGGI KTVTYEEAQK EFTVETFIQG 540 QQFIPKFGVP FIPGLLPQAQ QGRMH* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02468 | PLN02468 | 1.0e-153 | 27 | 555 | 535 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 2.0e-157 | 46 | 551 | 523 | + pectinesterase | ||
| PLN02745 | PLN02745 | 1.0e-161 | 45 | 555 | 530 | + Putative pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 2.0e-164 | 243 | 540 | 299 | + Pectinesterase. | ||
| PLN02217 | PLN02217 | 1.0e-174 | 30 | 556 | 530 | + probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ05229.1 | 0 | 40 | 565 | 38 | 570 | hypothetical protein OsI_27427 [Oryza sativa Indica Group] |
| GenBank | EAZ41174.1 | 0 | 40 | 565 | 38 | 570 | hypothetical protein OsJ_25671 [Oryza sativa Japonica Group] |
| RefSeq | NP_001060715.1 | 0 | 40 | 565 | 38 | 566 | Os07g0691100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151322.1 | 0 | 27 | 563 | 27 | 565 | pectinesterase-1 [Zea mays] |
| RefSeq | XP_002461260.1 | 0 | 27 | 565 | 27 | 571 | hypothetical protein SORBIDRAFT_02g043780 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 236 | 555 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 243 | 555 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 0.000000000000002 | 243 | 463 | 32 | 269 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 0.000000000000005 | 246 | 513 | 7 | 315 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 0.000000000000005 | 246 | 513 | 7 | 315 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
