y
Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si033152m |
Family | GH14 |
Protein Properties | Length: 532 Molecular Weight: 60090.8 Isoelectric Point: 5.0794 |
Chromosome | Chromosome/Scaffold: 2 Start: 42511222 End: 42514352 |
Description | beta-amylase 5 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 56 | 475 | 0 |
YVMLPLDIITVDNTFEKADETRAQLKKLTEAGVDGVMIDVWWGLVERKAPGVYDWSAYKQVFKLVQEAGLKLQAIMSCHQCGGNVGDVVNIPIPQWVRDI GEANPDIFYTNRRGTRNIEYLTLGVDDQPIFQGRTAIQLYADYMKSFRENMAEFLDAGVIVDIEVGLGPAGEMRYPSYPQSQGWVFPGIGEFICYDKYLE ADFKAAAAEAGHPEWELPDDAGEYNDTPENTQFFAENGTYQTEKGKFFLTWYSNKLIKHGDNILDEANKVFLGCTVQLAIKISGIHWWYRVPNHAAELTA GYYNLDDRDGYRTIAHMLTRHYACMNFTCAEMRDNEQSSEAKSAPEELVQQVLSAGWREGRNVACENALGRYDATAYNTILRNARPQGINKNGPPEHKLY GFTYLRVSDELLQGQNYTTF |
Full Sequence |
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Protein Sequence Length: 532 Download |
MRGSQLGVVA KIISSQFTHP SSVTTKQRAS QWVFRLEHSQ PATMAGNLLA NYVQVYVMLP 60 LDIITVDNTF EKADETRAQL KKLTEAGVDG VMIDVWWGLV ERKAPGVYDW SAYKQVFKLV 120 QEAGLKLQAI MSCHQCGGNV GDVVNIPIPQ WVRDIGEANP DIFYTNRRGT RNIEYLTLGV 180 DDQPIFQGRT AIQLYADYMK SFRENMAEFL DAGVIVDIEV GLGPAGEMRY PSYPQSQGWV 240 FPGIGEFICY DKYLEADFKA AAAEAGHPEW ELPDDAGEYN DTPENTQFFA ENGTYQTEKG 300 KFFLTWYSNK LIKHGDNILD EANKVFLGCT VQLAIKISGI HWWYRVPNHA AELTAGYYNL 360 DDRDGYRTIA HMLTRHYACM NFTCAEMRDN EQSSEAKSAP EELVQQVLSA GWREGRNVAC 420 ENALGRYDAT AYNTILRNAR PQGINKNGPP EHKLYGFTYL RVSDELLQGQ NYTTFKTFVS 480 RMHANLDYNP QVDPVPPLKR SKPEIPIEEI LEVAQPRLEP FPFNKNTDLP V* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02705 | PLN02705 | 5.0e-126 | 52 | 483 | 436 | + beta-amylase | ||
PLN02905 | PLN02905 | 2.0e-159 | 52 | 492 | 445 | + beta-amylase | ||
PLN00197 | PLN00197 | 6.0e-160 | 53 | 482 | 434 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 2.0e-178 | 3 | 482 | 484 | + beta-amylase | ||
PLN02801 | PLN02801 | 0 | 47 | 531 | 489 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD15902.1 | 0 | 44 | 531 | 1 | 488 | beta-amylase [Zea mays] |
DDBJ | BAC83773.1 | 0 | 44 | 531 | 1 | 488 | putative beta-amylase [Oryza sativa Japonica Group] |
DDBJ | BAH93971.1 | 0 | 11 | 531 | 912 | 1429 | Os07g0543200 [Oryza sativa Japonica Group] |
RefSeq | NP_001059907.1 | 0 | 11 | 531 | 503 | 1020 | Os07g0543300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001105496.1 | 0 | 44 | 531 | 1 | 488 | beta amylase5 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2xgi_A | 0 | 44 | 531 | 1 | 488 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 2xgb_A | 0 | 44 | 531 | 1 | 488 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 2xg9_A | 0 | 44 | 531 | 1 | 488 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 2xfy_A | 0 | 44 | 531 | 1 | 488 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 2xfr_A | 0 | 44 | 531 | 1 | 488 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO777976 | 467 | 69 | 531 | 0 |
HO803971 | 390 | 131 | 516 | 0 |
DV507828 | 283 | 75 | 357 | 0 |
DY266204 | 323 | 201 | 523 | 0 |
CN149100 | 273 | 41 | 313 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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