| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si033284m |
| Family | CE8 |
| Protein Properties | Length: 305 Molecular Weight: 32967.1 Isoelectric Point: 5.7902 |
| Chromosome | Chromosome/Scaffold: 2 Start: 36080474 End: 36081516 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 14 | 277 | 0 |
| QPHQYTTVAAAIAAAPANSDKRHVIHIKRGVYKEFVVVGQEKRNVVLVGDGMDATVISGSRCCADGYDTPGTAVLSVQGNGFIARDLCIENTAGPRKENG QAVALLSQSDQSVLYRCALRGYQDTLWCASPSSKQLYRECTISGTVDFVFGDAAAVFQSCDIRARLPMQGQENTITAQGRDRADSDGGFCFQSCTVAADE DLAARGAVVQTYLGRPWKPFSRVVFMQCTVSDVVDPRGWLPWERQVPPDTLYYGEYGNEGPGAA | |||
| Full Sequence |
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| Protein Sequence Length: 305 Download |
| TADVVVAARG WQRQPHQYTT VAAAIAAAPA NSDKRHVIHI KRGVYKEFVV VGQEKRNVVL 60 VGDGMDATVI SGSRCCADGY DTPGTAVLSV QGNGFIARDL CIENTAGPRK ENGQAVALLS 120 QSDQSVLYRC ALRGYQDTLW CASPSSKQLY RECTISGTVD FVFGDAAAVF QSCDIRARLP 180 MQGQENTITA QGRDRADSDG GFCFQSCTVA ADEDLAARGA VVQTYLGRPW KPFSRVVFMQ 240 CTVSDVVDPR GWLPWERQVP PDTLYYGEYG NEGPGAAACS FTVERFIKGN DWLPSTGVEY 300 KPGL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02314 | PLN02314 | 2.0e-102 | 1 | 300 | 319 | + pectinesterase | ||
| PLN02301 | PLN02301 | 5.0e-106 | 2 | 304 | 321 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 2.0e-106 | 2 | 304 | 320 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02201 | PLN02201 | 2.0e-117 | 1 | 304 | 322 | + probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 2.0e-134 | 3 | 290 | 306 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ07184.1 | 0 | 3 | 304 | 234 | 558 | hypothetical protein OsI_29430 [Oryza sativa Indica Group] |
| RefSeq | NP_001061940.1 | 0 | 3 | 304 | 234 | 555 | Os08g0450100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001147569.1 | 0 | 3 | 304 | 233 | 557 | pectinesterase PPE8B [Zea mays] |
| RefSeq | NP_189913.3 | 0 | 2 | 304 | 213 | 525 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002462596.1 | 0 | 18 | 304 | 18 | 319 | hypothetical protein SORBIDRAFT_02g028740 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 2 | 304 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 3 | 304 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 3uw0_A | 2e-22 | 14 | 277 | 40 | 336 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1qjv_B | 2e-19 | 18 | 279 | 18 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 2e-19 | 18 | 279 | 18 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EX673765 | 289 | 32 | 300 | 0 |
| DR937739 | 286 | 36 | 304 | 0 |
| DR100880 | 279 | 32 | 293 | 0 |
| EH695820 | 279 | 44 | 304 | 0 |
| JG626146 | 259 | 17 | 275 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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