| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si034019m |
| Family | GT35 |
| Protein Properties | Length: 1076 Molecular Weight: 120267 Isoelectric Point: 6.2156 |
| Chromosome | Chromosome/Scaffold: 9 Start: 5116112 End: 5123272 |
| Description | Glycosyl transferase, family 35 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT35 | 261 | 1069 | 0 |
| ALKQLGQNLEDVASQEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFKQLITKDGQEEIAENWLEMGYPWEIVRNDVSYPVKFYGKVVEGT DGRKHWIGGENIKAVAHDVPIPGYKTRTTNNLRLWSTTVPAQDFDLEAFNAGDHTKAYEAHLNAEKICHVLYPGDESPEGKVLRLKQQYTLCSASLQDII ARFESRAGDSLNWEDFPSKVAVQMNDTHPTLCIPELMRILIDFKGLSWDEAWSITERTVAYTNHTVLPEALEKWSLDIMQKLLPRHVEIIETIDQELINN IVTKYGTADTALLKKKLKEMRILDNVDLPASIAQLFVKPKEKKESPIKSKKKLLVKSLDTIAEVEEETELEEEETEVLSETEEENVESKEVEAEEDSEDE LDPFVKSDPKLPRVVRMANLCVVGGHSVNGVAEIHSEIVKQDVFNSFYEMWPTKFQNKTNGVTPRRWIRFCNPELSTIISKWTGSDDWVLNTDKLAELKK FADNEDLHSEWRAAKWANKMKVVSLIRDKTGYIVSPDAMFDVQVKRIHEYKRQLLNILGIVYRYKKMKEMSAEERIKSFVPRVCIFGGKAFATYIQAKRI VKFITDVAATVNHDSDIGDLLKVVFVPDYNVSVAEALIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIREEVGEENFFLFGAEAHEIV GLRKERAEGKFVPDPRFEEVKGFIRSGVFGTYNYDELMGSLEGNEGYGRADYFLVGKDFPSYIECQEKVDEAYRDQKLWTKMSILNTAGSSKFSSDRTIH EYAKDIWNI | |||
| Full Sequence |
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| Protein Sequence Length: 1076 Download |
| MNHAPPPWHR ALTWAHRPAA QHVRCPHRLA RSHGHSTHTC SERAGRTATA ETGEERYFKR 60 PLDFPPPREL VITHRIARIA AALPTARARA GAGAAMATNA SPPLQLATAF RPLASAAGGG 120 GGGLLAGGGG VATGRGRGRA QRRVAARSVA SDRDVQGPVS LEEGLPSVLN SIDSSAIASN 180 IKHHAEFKPL FSPEHFSPLK AYHATAKSVL DALLINWNAT YDYYDKMNVK QAYYLSMEFL 240 QGRALTNAIG NLELTGEYAE ALKQLGQNLE DVASQEPDAA LGNGGLGRLA SCFLDSLATL 300 NYPAWGYGLR YKYGLFKQLI TKDGQEEIAE NWLEMGYPWE IVRNDVSYPV KFYGKVVEGT 360 DGRKHWIGGE NIKAVAHDVP IPGYKTRTTN NLRLWSTTVP AQDFDLEAFN AGDHTKAYEA 420 HLNAEKICHV LYPGDESPEG KVLRLKQQYT LCSASLQDII ARFESRAGDS LNWEDFPSKV 480 AVQMNDTHPT LCIPELMRIL IDFKGLSWDE AWSITERTVA YTNHTVLPEA LEKWSLDIMQ 540 KLLPRHVEII ETIDQELINN IVTKYGTADT ALLKKKLKEM RILDNVDLPA SIAQLFVKPK 600 EKKESPIKSK KKLLVKSLDT IAEVEEETEL EEEETEVLSE TEEENVESKE VEAEEDSEDE 660 LDPFVKSDPK LPRVVRMANL CVVGGHSVNG VAEIHSEIVK QDVFNSFYEM WPTKFQNKTN 720 GVTPRRWIRF CNPELSTIIS KWTGSDDWVL NTDKLAELKK FADNEDLHSE WRAAKWANKM 780 KVVSLIRDKT GYIVSPDAMF DVQVKRIHEY KRQLLNILGI VYRYKKMKEM SAEERIKSFV 840 PRVCIFGGKA FATYIQAKRI VKFITDVAAT VNHDSDIGDL LKVVFVPDYN VSVAEALIPA 900 SELSQHISTA GMEASGTSNM KFAMNGCILI GTLDGANVEI REEVGEENFF LFGAEAHEIV 960 GLRKERAEGK FVPDPRFEEV KGFIRSGVFG TYNYDELMGS LEGNEGYGRA DYFLVGKDFP 1020 SYIECQEKVD EAYRDQKLWT KMSILNTAGS SKFSSDRTIH EYAKDIWNIR PVILP* 1080 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00343 | Phosphorylase | 4.0e-136 | 261 | 565 | 306 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
| cd04300 | GT1_Glycogen_Phosphorylase | 0 | 672 | 1069 | 407 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
| cd04300 | GT1_Glycogen_Phosphorylase | 0 | 182 | 565 | 388 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
| pfam00343 | Phosphorylase | 0 | 673 | 1071 | 404 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
| TIGR02093 | P_ylase | 0 | 673 | 1069 | 402 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004645 | phosphorylase activity |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK15695.1 | 0 | 147 | 1075 | 1 | 928 | AF327055_1 alpha 1,4-glucan phosphorylase L isozyme [Oryza sativa] |
| GenBank | ACC59201.1 | 0 | 96 | 1075 | 1 | 971 | plastid alpha-1,4-glucan phosphorylase [Triticum aestivum] |
| DDBJ | BAG49328.1 | 0 | 96 | 1075 | 1 | 978 | plastidial starch phosphorylase 1 [Oryza sativa Japonica Group] |
| GenBank | EEC76210.1 | 0 | 96 | 1075 | 1 | 964 | hypothetical protein OsI_13605 [Oryza sativa Indica Group] |
| GenBank | EEE59962.1 | 0 | 96 | 1075 | 1 | 977 | hypothetical protein OsJ_12655 [Oryza sativa Japonica Group] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2azd_B | 0 | 675 | 1070 | 404 | 795 | A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds |
| PDB | 2azd_B | 0 | 228 | 554 | 57 | 375 | A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds |
| PDB | 2azd_A | 0 | 675 | 1070 | 404 | 795 | A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds |
| PDB | 2azd_A | 0 | 228 | 554 | 57 | 375 | A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds |
| PDB | 2aw3_B | 0 | 675 | 1070 | 404 | 795 | A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1826 | EC-2.4.1.1 | phosphorylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO797178 | 401 | 676 | 1076 | 0 |
| HO778303 | 401 | 676 | 1076 | 0 |
| HO778303 | 397 | 201 | 597 | 0 |
| HO620767 | 403 | 674 | 1076 | 0 |
| HO613954 | 403 | 674 | 1076 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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