| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si034088m |
| Family | GH116 |
| Protein Properties | Length: 976 Molecular Weight: 109267 Isoelectric Point: 7.2219 |
| Chromosome | Chromosome/Scaffold: 9 Start: 16824822 End: 16832138 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 558 | 920 | 0 |
| GKFLYLEGVEYIMWNTYDVHFYASFALLDLFPKIELSIQRDFANAVLYEDRRKVKFLADGTSGIRKAKGAVPHDLGTHDPWHEMNAYNIHDTSKWKDLNP KFVLQIYRDFAATGDMQFGRDVWPAVCAAMDYMDQFDRDSDGLIENDGFPDQTYDAWTVHGISAYCGGLWLAALQAAATMAHRLGDRHYAEKYKLKFIKA KAVYEAKLWNGSYFNYDSGTSSNSKSIQADQLAGQWYTASSGLPPLFDEHKIRTALQKIFEFNVMKVKGGRMGAVNGMTPKGKVDETCMQSREIWTGVTY AVAANMLLHGMEHQGFTTAEGIFTAGWSEEGYGYWFQTPEGWTTDGHYRSLVYMRPLAIWAIQ | |||
| Full Sequence |
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| Protein Sequence Length: 976 Download |
| MVSGHIFHCR KNSWPAEEYV GRTALQLLDF DGGAPPEQAW RRKLNSHANL LKEFSVTFME 60 AMRMMSLGLR LWSYVREEAS HGRKAPIDPF TKERCRPSAS QGLPLGGMGS GSISRGFRGE 120 FKNWHIIPGL CESSPVMENQ FSIFVSRDGG NKKYSSVLAP GHHEGLKKNS DSGISSWDWN 180 LSGQHSTYHA LFPRAWTVYD GEPDPDLKIS CRQISPFIPH DYKDSSLPAA VFVYTLVNTG 240 KDRAKVSLLM TWANSIGGFS HNSGGHYNEP FIAEDGVSGV LLHHKTAKDN PPVTFAVAAC 300 ETQNVNVTVL PVFGLSGENH VSAKEMWNTM VQDGHFNREN FSAGSSMPSS PGQKLCAAVS 360 ASTWVEPHGR CTVVFALAWS SPKVKFQKGC TYNRRYTQFY GTSERSAVNL AHDALTKYKL 420 WEEKIEKWQN PILKDERLPE WYKFTLFNEL YFLVAGGTVW TDGQPPAIDD KANPGSNQQK 480 SSKRGSKDTK TESVKDSHVN LTAEQVPDSG HMTNDDERSV SKFAAIHGSQ MQEQTNGGLK 540 SEEPIPYLIS KDGPENVGKF LYLEGVEYIM WNTYDVHFYA SFALLDLFPK IELSIQRDFA 600 NAVLYEDRRK VKFLADGTSG IRKAKGAVPH DLGTHDPWHE MNAYNIHDTS KWKDLNPKFV 660 LQIYRDFAAT GDMQFGRDVW PAVCAAMDYM DQFDRDSDGL IENDGFPDQT YDAWTVHGIS 720 AYCGGLWLAA LQAAATMAHR LGDRHYAEKY KLKFIKAKAV YEAKLWNGSY FNYDSGTSSN 780 SKSIQADQLA GQWYTASSGL PPLFDEHKIR TALQKIFEFN VMKVKGGRMG AVNGMTPKGK 840 VDETCMQSRE IWTGVTYAVA ANMLLHGMEH QGFTTAEGIF TAGWSEEGYG YWFQTPEGWT 900 TDGHYRSLVY MRPLAIWAIQ YALSPPKAIL EAPKVNLMDR IHISPHMVRA ISEISIRKIA 960 PDNRCFPSSA FHCEC* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3408 | GDB1 | 4.0e-5 | 626 | 715 | 99 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 2.0e-28 | 102 | 462 | 376 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 4.0e-64 | 102 | 421 | 331 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 1.0e-70 | 557 | 923 | 385 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 1.0e-161 | 558 | 921 | 368 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL31035.1 | 0 | 1 | 975 | 1 | 967 | AC078948_19 unknown protein [Oryza sativa Japonica Group] |
| GenBank | EEC67156.1 | 0 | 1 | 975 | 1 | 974 | hypothetical protein OsI_34005 [Oryza sativa Indica Group] |
| GenBank | EEE51125.1 | 0 | 1 | 975 | 1 | 935 | hypothetical protein OsJ_31868 [Oryza sativa Japonica Group] |
| RefSeq | NP_001064833.1 | 0 | 1 | 975 | 1 | 974 | Os10g0473400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002518119.1 | 0 | 1 | 975 | 1 | 968 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GO856558 | 338 | 632 | 969 | 0 |
| GT045992 | 339 | 624 | 962 | 0 |
| GT045437 | 318 | 117 | 434 | 0 |
| GT048019 | 322 | 117 | 438 | 0 |
| GT045437 | 29 | 429 | 457 | 0.00003 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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