Basic Information | |
---|---|
Species | Setaria italica |
Cazyme ID | Si034234m |
Family | GH35 |
Protein Properties | Length: 851 Molecular Weight: 91786.5 Isoelectric Point: 5.9353 |
Chromosome | Chromosome/Scaffold: 9 Start: 50971903 End: 50977386 |
Description | beta-galactosidase 8 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH35 | 34 | 337 | 0 |
LVIDGVRRVLVSGSIHYPRSTPDMWPGLIQKAKDGGLDVIETYVFWDIHEPVRGQYDFEGRKDLAAFVKAVADAGLYVHLRIGPYVCAEWNYGGFPLWLH FIPGIKFRTDNEPFKSEMQRFTTKVVDTMKGAGLYASQGGPIILSQIENEYGNVDKAYGAPGKAYMRWAAGMAVSLDTGVPWVMCQQADAPDPLINTCNG FYCDQFTPNSAAKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFYQRGGTFQNYYMYHGGTNLDRSTGGPFIATSYDYDAPIDEYGLVRRPKWGHLR DVHK |
Full Sequence |
---|
Protein Sequence Length: 851 Download |
MAATALLLPA AAVLLLCLAS GSRATNVTYD HRALVIDGVR RVLVSGSIHY PRSTPDMWPG 60 LIQKAKDGGL DVIETYVFWD IHEPVRGQYD FEGRKDLAAF VKAVADAGLY VHLRIGPYVC 120 AEWNYGGFPL WLHFIPGIKF RTDNEPFKSE MQRFTTKVVD TMKGAGLYAS QGGPIILSQI 180 ENEYGNVDKA YGAPGKAYMR WAAGMAVSLD TGVPWVMCQQ ADAPDPLINT CNGFYCDQFT 240 PNSAAKPKMW TENWSGWFLS FGGAVPYRPV EDLAFAVARF YQRGGTFQNY YMYHGGTNLD 300 RSTGGPFIAT SYDYDAPIDE YGLVRRPKWG HLRDVHKAIK LCEPALIATD PSYTSLGQNA 360 EAAVYKAGSV CAAFLANIDG QSDKTVTFNG KMYNLPAWSV SILPDCKNVV LNTAQINSQV 420 TNSEMRYLES STIASDGSFT TPELAVSGWS YAIEPVGITK DNALTKSGLM EQINTTADAS 480 DFLWYSTSFT VKGDEPYLNG SQSNLLVNSL GHVLQVYVNG KIAGSAQGSA SSSLISWQKA 540 VTLVPGMNKI DLLSATVGLT NYGAFFDLVG AGITGPVKLS GPSGALDLSS AQWTYQIGLR 600 GEDLHLYDPS EASPEWVSSN AYPINQPLIW YKTKFTAPAG DDPVAIDFTG MGKGEAWVNG 660 QSIGRYWPTN LAPQSGCVNS CNYRGSYSSS KCLKKCGQPS QTLYHVPRSF LQPGSNDLVL 720 FEQFGGDPSK ISFVTRQTGS VCAQVSEAHP AQIDSWISSQ QKMQRSGPEL RLECPKEGQV 780 ISSIKFASFG TPSGTCGSYS HGECSSTQAL SVVQEACIGV SSCSVPVSSN YFGDPCTGVT 840 KSLAVEAACS * |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.0007 | 49 | 185 | 161 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 3.0e-21 | 27 | 329 | 368 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 4.0e-24 | 772 | 849 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 1.0e-162 | 33 | 339 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 26 | 850 | 830 | + beta-galactosidase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ24672.1 | 0 | 22 | 850 | 28 | 861 | hypothetical protein OsJ_08441 [Oryza sativa Japonica Group] |
RefSeq | NP_001049591.1 | 0 | 22 | 850 | 126 | 956 | Os03g0255100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001146370.1 | 0 | 17 | 850 | 20 | 852 | hypothetical protein LOC100279948 [Zea mays] |
Swiss-Prot | Q10NX8 | 0 | 22 | 850 | 28 | 858 | BGAL6_ORYSJ RecName: Full=Beta-galactosidase 6; Short=Lactase 6; Flags: Precursor |
RefSeq | XP_002465536.1 | 0 | 17 | 850 | 27 | 860 | hypothetical protein SORBIDRAFT_01g040750 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 33 | 335 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.00002 | 501 | 730 | 396 | 578 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 7e-36 | 34 | 322 | 10 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 0.00002 | 515 | 738 | 411 | 586 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_A | 7e-36 | 34 | 322 | 10 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |