| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si034250m |
| Family | GH35 |
| Protein Properties | Length: 842 Molecular Weight: 92815.1 Isoelectric Point: 6.7125 |
| Chromosome | Chromosome/Scaffold: 9 Start: 55447738 End: 55453811 |
| Description | beta-galactosidase 3 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 35 | 337 | 0 |
| LIDGQRRILFSGSIHYPRSTPDMWEELIQKAKDGGLDVIQTYVFWNGHEPTPGNYYFEERYDLVRFVKTVQKAGLFVHLRIGPYICGEWNFGGFPVWLKY VPGISFRTDNEPFKTAMQGFTEKIVGMMKSEKLFASQGGPIILSQIENEYGPEGKEFGAAGQSYINWAAKMAVGLGTGVPWVMCKEDDAPDPVINACNGF YCDAFSPNKPYKPMMWTEAWSGWFTEFGGTIRQRPVEDLAFAVARFVQKGGSFINYYMYHGGTNFGRTAGGPFITTSYDYDAPIDEYGLVREPKHSHLKE LHR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 842 Download |
| MGRWWPAALL GCAVAVAVLA AAVECAVTYD KKAVLIDGQR RILFSGSIHY PRSTPDMWEE 60 LIQKAKDGGL DVIQTYVFWN GHEPTPGNYY FEERYDLVRF VKTVQKAGLF VHLRIGPYIC 120 GEWNFGGFPV WLKYVPGISF RTDNEPFKTA MQGFTEKIVG MMKSEKLFAS QGGPIILSQI 180 ENEYGPEGKE FGAAGQSYIN WAAKMAVGLG TGVPWVMCKE DDAPDPVINA CNGFYCDAFS 240 PNKPYKPMMW TEAWSGWFTE FGGTIRQRPV EDLAFAVARF VQKGGSFINY YMYHGGTNFG 300 RTAGGPFITT SYDYDAPIDE YGLVREPKHS HLKELHRAVK LCEQALVSVD PAITTLGTMQ 360 EAHVFRSPSG CAAFLANYNS NSYAKVVFNN EHYSLPPWSI SILPDCKNVV FNSATVGVQT 420 SQMQMWADGA SSMMWERYDE EVDSLAAAPL LTTTGLLEQL NVTRDSSDYL WYITSVEISP 480 SENFLQGAKP LSLSVQSAGH TLHIFINGQL QGSAYGTRED RRIKYNGNAN LRAGTNKIAL 540 LSVACGLPNV GVHYETWNTG VVGPVVLHGL DEGSRDLTWQ TWSYQVGLKG EQMNLNSVQG 600 SSSVEWMQGS LLAQNQQPLA WYRAYFETPS GDEPLALDMG SMGKGQIWIN GQSIGRYWTA 660 YANGDCKGCS YTGTFRAPKC QAGCGQPTQR WYHVPRSWLQ PTRNLLVVFE ELGGDSSKIA 720 LVKRSVSSVC ADVSEDHPNI KKWQIESYGE REYHRAKVHL KCAPGQSISA IKFASFGTPM 780 GTCGSFQQGD CHSANSHTVL EKKCIGLQRC VVAISPENFG GDPCPNVTKR VAVEAVCSPT 840 A* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 0.006 | 49 | 191 | 159 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 3.0e-19 | 29 | 328 | 365 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam02140 | Gal_Lectin | 2.0e-22 | 760 | 837 | 82 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 3.0e-164 | 35 | 339 | 320 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 28 | 838 | 812 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM22973.1 | 0 | 24 | 841 | 24 | 843 | AF499737_1 beta-galactosidase [Oryza sativa Japonica Group] |
| GenBank | EEC74580.1 | 0 | 24 | 841 | 24 | 851 | hypothetical protein OsI_10152 [Oryza sativa Indica Group] |
| GenBank | EEE58382.1 | 0 | 24 | 841 | 24 | 851 | hypothetical protein OsJ_09539 [Oryza sativa Japonica Group] |
| RefSeq | NP_001049068.1 | 0 | 24 | 841 | 24 | 841 | Os03g0165400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002465807.1 | 0 | 24 | 841 | 24 | 842 | hypothetical protein SORBIDRAFT_01g046160 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 0 | 31 | 335 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 7.00649e-43 | 27 | 437 | 11 | 434 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 7.00649e-43 | 27 | 437 | 11 | 434 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
