y
Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si034295m |
Family | GH89 |
Protein Properties | Length: 810 Molecular Weight: 91428 Isoelectric Point: 7.1368 |
Chromosome | Chromosome/Scaffold: 9 Start: 45983736 End: 45991832 |
Description | alpha-N-acetylglucosaminidase family / NAGLU family |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH89 | 102 | 806 | 0 |
AEILIQGTTGVELVSGLHWYLKYWCGVHISWDKTGGAQLASVPSPGSLPRVKGEGVKIERPVPWNYYQNVVTSSYSFVWWDWKRWEKEIDWMALQGINLP LAFTGQEAIWQKVFKSFNVTDRDLDDFFGGPAFLAWARMGNLHGWGGPLSQNWLDQQLALQKKILSRMIEFGMVPVLPSFSGNVPAVFSKLFPSANITQL GDWNTVDADPRWCCTYLLGPSDALFIEVGQAFIKQQIKEYGDVTNIYNCDTFNENTPPTNEPAYISSLGSAIYEAMSRGNKNAVWLMQGWLFYSDAAFWK EPQMKALLHSVPIGKMIVLDLFADVKPIWKMSSQFYGVPYIWCLLHNFGGNIEMYGILDSIASGPIDARTSYNSTMIGVGMCMEGIEQNPVVYELTSEMA FRNKKVEVEDWLKTYSNRRYGQANAEIEKAWRYLYHTIYNCTDGIADHNKDYIVEFPDISPSSFSTQLSKRRGMSISSNHRRFFLSEVSGSLPHPHLWYS TKEAIKALELFLNAGNDFSKSITYRYDLVDLTRQCLSKLANEVYLDAMRSYQKKDSNGLNSHARKFLEIIADIDTLLAADDNFLLGPWLESAKSLAMTES ERKQYEWNARTQVTMWYDNTETEQSKLHDYANKFWSGLLKSYYLPRASKYFAYLTRSLQENRSFQLEEWRKDWISYSNEWQSGKELYGVKATGDALAIAR SLYRK |
Full Sequence |
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Protein Sequence Length: 810 Download |
MGPPPPLPLL LFVLLLAILP SPPAAAAAAG GPSAWGALRG AAGSRRASPA EQERAAAGVL 60 LRLLPSHARS FNFQIDSKGS VCGESSCFRI SNVVDNSGKG GAEILIQGTT GVELVSGLHW 120 YLKYWCGVHI SWDKTGGAQL ASVPSPGSLP RVKGEGVKIE RPVPWNYYQN VVTSSYSFVW 180 WDWKRWEKEI DWMALQGINL PLAFTGQEAI WQKVFKSFNV TDRDLDDFFG GPAFLAWARM 240 GNLHGWGGPL SQNWLDQQLA LQKKILSRMI EFGMVPVLPS FSGNVPAVFS KLFPSANITQ 300 LGDWNTVDAD PRWCCTYLLG PSDALFIEVG QAFIKQQIKE YGDVTNIYNC DTFNENTPPT 360 NEPAYISSLG SAIYEAMSRG NKNAVWLMQG WLFYSDAAFW KEPQMKALLH SVPIGKMIVL 420 DLFADVKPIW KMSSQFYGVP YIWCLLHNFG GNIEMYGILD SIASGPIDAR TSYNSTMIGV 480 GMCMEGIEQN PVVYELTSEM AFRNKKVEVE DWLKTYSNRR YGQANAEIEK AWRYLYHTIY 540 NCTDGIADHN KDYIVEFPDI SPSSFSTQLS KRRGMSISSN HRRFFLSEVS GSLPHPHLWY 600 STKEAIKALE LFLNAGNDFS KSITYRYDLV DLTRQCLSKL ANEVYLDAMR SYQKKDSNGL 660 NSHARKFLEI IADIDTLLAA DDNFLLGPWL ESAKSLAMTE SERKQYEWNA RTQVTMWYDN 720 TETEQSKLHD YANKFWSGLL KSYYLPRASK YFAYLTRSLQ ENRSFQLEEW RKDWISYSNE 780 WQSGKELYGV KATGDALAIA RSLYRKYFS* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam12971 | NAGLU_N | 2.0e-21 | 52 | 152 | 101 | + Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain. Alpha-N-acetylglucosaminidase, a lysosomal enzyme required for the stepwise degradation of heparan sulfate. Mutations on the alpha-N-acetylglucosaminidase (NAGLU) gene can lead to Mucopolysaccharidosis type IIIB (MPS IIIB; or Sanfilippo syndrome type B) characterized by neurological dysfunction but relatively mild somatic manifestations. The structure shows that the enzyme is composed of three domains. This N-terminal domain has an alpha-beta fold. | ||
pfam12972 | NAGLU_C | 3.0e-92 | 511 | 807 | 297 | + Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain. Alpha-N-acetylglucosaminidase, a lysosomal enzyme required for the stepwise degradation of heparan sulfate. Mutations on the alpha-N-acetylglucosaminidase (NAGLU) gene can lead to Mucopolysaccharidosis type IIIB (MPS IIIB; or Sanfilippo syndrome type B) characterized by neurological dysfunction but relatively mild somatic manifestations. The structure shows that the enzyme is composed of three domains. This C-terminal domain has an all alpha helical fold. | ||
pfam05089 | NAGLU | 0 | 167 | 503 | 337 | + Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain. Alpha-N-acetylglucosaminidase, a lysosomal enzyme required for the stepwise degradation of heparan sulfate. Mutations on the alpha-N-acetylglucosaminidase (NAGLU) gene can lead to Mucopolysaccharidosis type IIIB (MPS IIIB; or Sanfilippo syndrome type B) characterized by neurological dysfunction but relatively mild somatic manifestations. The structure shows that the enzyme is composed of three domains. This central domain has a tim barrel fold. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI24942.1 | 0 | 9 | 809 | 69 | 868 | unnamed protein product [Vitis vinifera] |
GenBank | EEC75285.1 | 0 | 47 | 808 | 51 | 811 | hypothetical protein OsI_11626 [Oryza sativa Indica Group] |
GenBank | EEE59081.1 | 0 | 47 | 809 | 51 | 812 | hypothetical protein OsJ_10898 [Oryza sativa Japonica Group] |
RefSeq | XP_002314048.1 | 0 | 25 | 808 | 19 | 805 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002465249.1 | 0 | 35 | 809 | 39 | 776 | hypothetical protein SORBIDRAFT_01g034960 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2vcc_A | 0 | 91 | 798 | 201 | 867 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 2vcb_A | 0 | 91 | 798 | 201 | 867 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 2vca_A | 0 | 91 | 798 | 201 | 867 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 2vc9_A | 0 | 91 | 798 | 201 | 867 | A Chain A, Family 89 Glycoside Hydrolase From Clostridium Perfringens In Complex With 2-Acetamido-1,2-Dideoxynojirmycin |
PDB | 4a4a_A | 0 | 91 | 798 | 224 | 890 | A Chain A, Cpgh89 (E483q, E601q), From Clostridium Perfringens, In Complex With Its Substrate Glcnac-Alpha-1,4-Galactose |