Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si034354m |
Family | AA3 |
Protein Properties | Length: 765 Molecular Weight: 82590.5 Isoelectric Point: 8.3207 |
Chromosome | Chromosome/Scaffold: 9 Start: 16748621 End: 16755337 |
Description | Long-chain fatty alcohol dehydrogenase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 249 | 756 | 1.4013e-45 |
HHTVQCDVVIVGSGCGGGVAAAVLAAAGHKVVVVEKGDYFTAEDYSSIEGPSMERLYEKGGIFCTSNASTIMFTGATVGGGSAINWSASIRTPEWVTQEW AREHGLPVFGSPEYAHAMDAVCTRLAVTSGCREEGFQNKALRNGCEALGLRADAVPRNTSEGHFCGSCHLGCPTGEKRGTDTTWLVDAVAQGAVVLTGCK AERFVLESNPGKNGCRSKRCVGLVAKCMGDGITRKLRIEAKVSISACGALMTPPLLRRSGLKNRHIGRNLHLHPVSMAWGYFPDGTPEPRPLTGKCYEGG IITTLHRVTARTIVQTPALGPGSMASLIPWESGRDMKERMLRYARTAHAFALVRDRGAGTVGREGRVRYVPSSEDVEELRNGLRRALRILVAAGAAEVGT HRSDGLRLRCEGLRDEDLEAFLNEVTVAKGPMIPGSDTWALLCSAHQMGSCRMGSRPRDGAVDGRGESWEAEGLYVCDGSLLPTAVGVNPMITIQSTAYY VSKGIAES |
Full Sequence |
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Protein Sequence Length: 765 Download |
MSTQQQEKAS AAAGRGSPLL RRCKRERYTH GLRPPQMEAL RAMCGALIPS LPVEGPFHGD 60 KHGGGNKDDV ERFYRASAAD GAIPDEVAEM ATGCAREAML LVRVILWMLS TKVGTFVLCG 120 WLCVSSRFPY VFKFADMPLE RREEVLKWWS KTRWLFPLKV TFVLVKILSH YSFYTTINEH 180 SDNPSWKAIG YSVPDVDRPQ EDLSEAAPSP SPRPLDSGVV ETRSLDDAAL LRSLMDKGLA 240 VKADVSGPHH TVQCDVVIVG SGCGGGVAAA VLAAAGHKVV VVEKGDYFTA EDYSSIEGPS 300 MERLYEKGGI FCTSNASTIM FTGATVGGGS AINWSASIRT PEWVTQEWAR EHGLPVFGSP 360 EYAHAMDAVC TRLAVTSGCR EEGFQNKALR NGCEALGLRA DAVPRNTSEG HFCGSCHLGC 420 PTGEKRGTDT TWLVDAVAQG AVVLTGCKAE RFVLESNPGK NGCRSKRCVG LVAKCMGDGI 480 TRKLRIEAKV SISACGALMT PPLLRRSGLK NRHIGRNLHL HPVSMAWGYF PDGTPEPRPL 540 TGKCYEGGII TTLHRVTART IVQTPALGPG SMASLIPWES GRDMKERMLR YARTAHAFAL 600 VRDRGAGTVG REGRVRYVPS SEDVEELRNG LRRALRILVA AGAAEVGTHR SDGLRLRCEG 660 LRDEDLEAFL NEVTVAKGPM IPGSDTWALL CSAHQMGSCR MGSRPRDGAV DGRGESWEAE 720 GLYVCDGSLL PTAVGVNPMI TIQSTAYYVS KGIAESLAAR VKKP* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
TIGR03970 | Rv0697 | 8.0e-5 | 616 | 742 | 131 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. |
pfam05199 | GMC_oxred_C | 1.0e-19 | 614 | 747 | 136 | + GMC oxidoreductase. This domain found associated with pfam00732. |
COG2303 | BetA | 2.0e-25 | 323 | 762 | 503 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] |
pfam00732 | GMC_oxred_N | 1.0e-86 | 301 | 523 | 226 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
Gene Ontology | |
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GO Term | Description |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACR36691.1 | 0 | 15 | 758 | 34 | 776 | unknown [Zea mays] |
DDBJ | BAH94933.1 | 0 | 15 | 758 | 10 | 759 | Os10g0474966 [Oryza sativa Japonica Group] |
RefSeq | NP_001142399.1 | 0 | 90 | 758 | 1 | 668 | hypothetical protein LOC100274574 [Zea mays] |
RefSeq | XP_002464495.1 | 0 | 1 | 758 | 1 | 767 | hypothetical protein SORBIDRAFT_01g019470 [Sorghum bicolor] |
RefSeq | XP_002464496.1 | 0 | 37 | 763 | 1 | 732 | hypothetical protein SORBIDRAFT_01g019480 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3t37_A | 0.00004 | 250 | 521 | 14 | 308 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
PDB | 3cox_A | 0.0008 | 686 | 746 | 439 | 494 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
PDB | 1coy_A | 0.0008 | 686 | 746 | 439 | 494 | A Chain A, Crystal Structure Of Cholesterol Oxidase Complexed With A Steroid Substrate. Implications For Fad Dependent Alcohol Oxidases |
PDB | 1b8s_A | 0.001 | 694 | 746 | 442 | 489 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
PDB | 2gew_A | 0.001 | 694 | 746 | 442 | 489 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |