| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si034362m |
| Family | AA3 |
| Protein Properties | Length: 762 Molecular Weight: 82296.9 Isoelectric Point: 8.1867 |
| Chromosome | Chromosome/Scaffold: 9 Start: 16726481 End: 16731346 |
| Description | fatty alcohol oxidase 3 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 244 | 754 | 0 |
| SDANHHVVQCDAVIVGSGCGGGVAAAVLASAGYKVVVVEKGDYFTASDYSSIEGPSMERLFERGGIFCTSNVTTMIFTGATVGGGSAVNWSASIRTPKEV TQEWAREHGLPVFASPGYAQAMDAVCARLSVTDGCREEGFQNKVVRRGCEALGLCADAVPRNSSEGHFCGSCNFGCPTGDKRGTDTTWLVDAVASGAVIL TGCKAERFVFEKNSGGGRGRGKKCVGLVSTCASDGITKKLRIEAKVSIAACGALMTPPLLRNSGLKNRHIGRNLHLHPVSMAWGYFPENRQDPQLTGKSY EGGIITSMHRVTERTIIETPALGPGAFAAMVPWESGRDMKERMRRYSRTAHAFALVRDRGAGFVDGEGRVRFTPSREDVEELRNGLRRVLRILVAAGAAE VGTHRSDGLRLRCKGLRDEDLEAFLDEVTIEKGPMHSTADKWALHCSAHQMGSCRMGSSPRDGAVDGRGESWEAEGLYVCDGSLLPTAVGVNPMITIQSI AYCLSKGIAET | |||
| Full Sequence |
|---|
| Protein Sequence Length: 762 Download |
| MAVQGEEREK AAAAAAARGH PLLRGWRRDR YTHGMHPAQM EALRAMCGAL IPSLPADGAH 60 GRGDPPGGKD LERFYRASAA DSTIPDEVAE LMVTRCIREA VALAWVVLWV LSTRVGTLLL 120 CGRLCLAGGF PYVRKFADMT PERREAALQR WNRVRWLFPL RIAFAIVKIL CHYVFYAMVN 180 ENSENPYWKA IGYSVHEPRE DQTEAAPSPS RPLDVGVVET RLLDDNALLR SLVGRGLTVK 240 PVASDANHHV VQCDAVIVGS GCGGGVAAAV LASAGYKVVV VEKGDYFTAS DYSSIEGPSM 300 ERLFERGGIF CTSNVTTMIF TGATVGGGSA VNWSASIRTP KEVTQEWARE HGLPVFASPG 360 YAQAMDAVCA RLSVTDGCRE EGFQNKVVRR GCEALGLCAD AVPRNSSEGH FCGSCNFGCP 420 TGDKRGTDTT WLVDAVASGA VILTGCKAER FVFEKNSGGG RGRGKKCVGL VSTCASDGIT 480 KKLRIEAKVS IAACGALMTP PLLRNSGLKN RHIGRNLHLH PVSMAWGYFP ENRQDPQLTG 540 KSYEGGIITS MHRVTERTII ETPALGPGAF AAMVPWESGR DMKERMRRYS RTAHAFALVR 600 DRGAGFVDGE GRVRFTPSRE DVEELRNGLR RVLRILVAAG AAEVGTHRSD GLRLRCKGLR 660 DEDLEAFLDE VTIEKGPMHS TADKWALHCS AHQMGSCRMG SSPRDGAVDG RGESWEAEGL 720 YVCDGSLLPT AVGVNPMITI QSIAYCLSKG IAETLTQGEK Q* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03970 | Rv0697 | 0.002 | 662 | 744 | 87 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| pfam05199 | GMC_oxred_C | 1.0e-20 | 612 | 747 | 136 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 1.0e-21 | 322 | 745 | 475 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 4.0e-84 | 300 | 522 | 226 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACR36691.1 | 0 | 1 | 761 | 1 | 781 | unknown [Zea mays] |
| DDBJ | BAH94933.1 | 0 | 18 | 757 | 10 | 760 | Os10g0474966 [Oryza sativa Japonica Group] |
| RefSeq | NP_001142399.1 | 0 | 92 | 759 | 1 | 671 | hypothetical protein LOC100274574 [Zea mays] |
| RefSeq | XP_002464494.1 | 0 | 179 | 761 | 3 | 587 | hypothetical protein SORBIDRAFT_01g019460 [Sorghum bicolor] |
| RefSeq | XP_002464495.1 | 0 | 6 | 761 | 4 | 772 | hypothetical protein SORBIDRAFT_01g019470 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ljp_B | 0.000005 | 441 | 743 | 225 | 518 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 3ljp_A | 0.000005 | 441 | 743 | 225 | 518 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 2jbv_B | 0.00001 | 441 | 743 | 225 | 518 | A Chain A, Crystal Structure Of Choline Oxidase Reveals Insights Into The Catalytic Mechanism |
| PDB | 2jbv_A | 0.00001 | 441 | 743 | 225 | 518 | A Chain A, Crystal Structure Of Choline Oxidase Reveals Insights Into The Catalytic Mechanism |
| PDB | 3nne_H | 0.00001 | 441 | 743 | 225 | 518 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
