| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si034569m |
| Family | GH51 |
| Protein Properties | Length: 665 Molecular Weight: 72918.9 Isoelectric Point: 4.5386 |
| Chromosome | Chromosome/Scaffold: 9 Start: 47867412 End: 47875129 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH51 | 224 | 534 | 0 |
| IWFDQVSLMPEDTYMGHGFRKDLASMLANLKPRFLKFPGGNYVMGNYLVNSFRWSETVGPWEERPGHFNDAWAYWTDDGLGFFEFLQLAEDLGACPVWVV NDGASLNEEVPSATIAAFVKDVVNGIEFARGDPQTAWGSVRAAMGHPEPFQLYYVSVGNQECSKYYYKDNYVKFYSAIKASYPDIKIISSCDRSAISPVN PADLYDVHVYTSSGDMFSKSRMFDNTARSGPKAIVSEYAVTGNDAGRGTLIAALAEAAFLIGLERNSDVVEMASCAPLFVNDNDRRWNPDAIVFNSWQHY GCPNYWMLHFF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 665 Download |
| MGIPRACSFY WLFDVLVLVC GLCQILYIGS VAAQTAQLSV DASPHNAQVI PGNMFGIFFE 60 EINHAGAGGL WAELVSNRGF EAGGANTPSN IDPWLIIGDE SNIIVATDRS SCFAGNPIAL 120 RMEVLCEASG CPSGGVGIYN PGYWGMNIER TKVYRATMYI RSSEAVELTV SLTSSDGLQN 180 LASHTITGDK EDFVEWTKVE FDLESNDRNT NSRLQLTTTK SGIIWFDQVS LMPEDTYMGH 240 GFRKDLASML ANLKPRFLKF PGGNYVMGNY LVNSFRWSET VGPWEERPGH FNDAWAYWTD 300 DGLGFFEFLQ LAEDLGACPV WVVNDGASLN EEVPSATIAA FVKDVVNGIE FARGDPQTAW 360 GSVRAAMGHP EPFQLYYVSV GNQECSKYYY KDNYVKFYSA IKASYPDIKI ISSCDRSAIS 420 PVNPADLYDV HVYTSSGDMF SKSRMFDNTA RSGPKAIVSE YAVTGNDAGR GTLIAALAEA 480 AFLIGLERNS DVVEMASCAP LFVNDNDRRW NPDAIVFNSW QHYGCPNYWM LHFFKDSSGG 540 ALHPSTIQLS NYDQLVTSAI TWNNSQDGNT YLKIKVVNFG SKAVNLNISV TGLETDIRTF 600 GSIKTVLTSG WLRDENSFQQ PDKVVPAASP ITNAGEQMGV LLDSYSLTSF DLLLGSSQAM 660 HSST* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam06964 | Alpha-L-AF_C | 2.0e-25 | 459 | 646 | 205 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| COG3534 | AbfA | 3.0e-26 | 241 | 383 | 143 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| smart00813 | Alpha-L-AF_C | 4.0e-37 | 459 | 646 | 198 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF95656.1 | 0 | 1 | 654 | 1 | 657 | Alpha-L-arabinofuranosidase C-terminus family protein, expressed [Oryza sativa (japonica cultivar-group)] |
| DDBJ | BAC10349.1 | 0 | 1 | 658 | 1 | 660 | putative arabinoxylan narabinofuranohydrolase isoenzyme AXAH-I [Oryza sativa Japonica Group] |
| GenBank | EEC75141.1 | 0 | 1 | 654 | 1 | 661 | hypothetical protein OsI_11337 [Oryza sativa Indica Group] |
| GenBank | EEE58961.1 | 0 | 1 | 654 | 1 | 661 | hypothetical protein OsJ_10647 [Oryza sativa Japonica Group] |
| RefSeq | XP_002463418.1 | 0 | 1 | 658 | 1 | 662 | hypothetical protein SORBIDRAFT_02g043530 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ug5_F | 4e-17 | 240 | 632 | 67 | 482 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3ug5_E | 4e-17 | 240 | 632 | 67 | 482 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3ug5_D | 4e-17 | 240 | 632 | 67 | 482 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3ug5_C | 4e-17 | 240 | 632 | 67 | 482 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3ug5_B | 4e-17 | 240 | 632 | 67 | 482 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
