Basic Information | |
---|---|
Species | Setaria italica |
Cazyme ID | Si034708m |
Family | GH3 |
Protein Properties | Length: 623 Molecular Weight: 67508.4 Isoelectric Point: 8.0098 |
Chromosome | Chromosome/Scaffold: 9 Start: 5524410 End: 5527731 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH3 | 103 | 337 | 0 |
LSTRLGIPIIYGIDAVHGHNNVYKATIFPHNVGLGATRDPDLVKRIGQATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDPKVVQSMTSLISGLQ GEVPANDVGRPYVAGSKNVAACAKHYVGDGGTHQGINENNTIIDTHGLLSIHMPPYYNSIIRGVSTVMVSYSSWNGVKMHANHFLVTDFLKNKLKFRGFV ISDWEGIDRITSPPHANYSYSIEAGVGAGIDMIMV |
Full Sequence |
---|
Protein Sequence Length: 623 Download |
MASLHKITFV LMFCLVALGR AEYLRYKDPK QPVSVRVKDL LSRMTLAEKI GQMTQIEREN 60 ATADALAKYF IGSVLSGGGS VPAPQASAQA WASMVSEMQK GALSTRLGIP IIYGIDAVHG 120 HNNVYKATIF PHNVGLGATR DPDLVKRIGQ ATALEVRATG IPYVFAPCIA VCRDPRWGRC 180 YESYSEDPKV VQSMTSLISG LQGEVPANDV GRPYVAGSKN VAACAKHYVG DGGTHQGINE 240 NNTIIDTHGL LSIHMPPYYN SIIRGVSTVM VSYSSWNGVK MHANHFLVTD FLKNKLKFRG 300 FVISDWEGID RITSPPHANY SYSIEAGVGA GIDMIMVPFR YTEFIDDLTA QVQNKVIPMS 360 RIDDAVYRIL RVKFSMGLFE NPYPDTSLAG ELGKQEHRDL AREAVRKSLV LLKNGKSSYS 420 PLLPLPKKAG KILVAGSHAD NLGNQCGGWT ITWQGQPGNN ITAGTTILEG IKATIDPSTQ 480 VVYSENPDST VLADKYDYAV VVVGEPPYAE TFGDNLNLTI PAPGPSVIQS VCKATKCVVV 540 LISGRPLVVE PYLGDMDAFV AAWLPGSEGQ GVADVLFGDY GFTGKLSRTW FKSVDQLPMS 600 VGDKHYDPLF PFGFGLTTKG TK* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 2.0e-44 | 32 | 608 | 629 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 7.0e-55 | 409 | 617 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 2.0e-85 | 29 | 617 | 668 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 2.0e-90 | 44 | 477 | 441 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 9.0e-91 | 45 | 372 | 332 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC49170.1 | 0 | 1 | 622 | 1 | 624 | beta-D-glucan exohydrolase, isoenzyme ExoII [Hordeum vulgare subsp. vulgare] |
GenBank | AAF79936.1 | 0 | 1 | 622 | 1 | 622 | exoglucanase precursor [Zea mays] |
GenBank | AAM13694.1 | 0 | 1 | 622 | 1 | 624 | beta-D-glucan exohydrolase [Triticum aestivum] |
RefSeq | NP_001051275.1 | 0 | 1 | 619 | 1 | 621 | Os03g0749300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130296.1 | 0 | 1 | 622 | 1 | 622 | exoglucanase1 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 22 | 622 | 1 | 603 | A Chain A, Crystal Structure Of A Putative Alpha-Rhamnosidase From Bacteroides Thetaiotaomicron |
PDB | 1iex_A | 0 | 22 | 622 | 1 | 603 | A Chain A, Crystal Structure Of A Putative Alpha-Rhamnosidase From Bacteroides Thetaiotaomicron |
PDB | 1iew_A | 0 | 22 | 622 | 1 | 603 | A Chain A, Crystal Structure Of A Putative Alpha-Rhamnosidase From Bacteroides Thetaiotaomicron |
PDB | 1iev_A | 0 | 22 | 622 | 1 | 603 | A Chain A, Crystal Structure Of A Putative Alpha-Rhamnosidase From Bacteroides Thetaiotaomicron |
PDB | 1ieq_A | 0 | 22 | 622 | 1 | 603 | A Chain A, Crystal Structure Of A Putative Alpha-Rhamnosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |