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Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si034714m |
Family | GH100 |
Protein Properties | Length: 622 Molecular Weight: 69414.3 Isoelectric Point: 5.7084 |
Chromosome | Chromosome/Scaffold: 9 Start: 48091368 End: 48097496 |
Description | Plant neutral invertase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH100 | 133 | 591 | 0 |
SPEEKEAWWLLGRAVVNYCGSAVGTVAANDPSTSQMLNYDQVFIRDFVPSAIAFLLKGESDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRSVP LDGNSEAFEEILDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLSDGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQ ALFYSALRCAREMISVNDGSKNLIRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSHDAINKFNIYPEQIPSWLADWIPVKGGYLIGNLQPAHMD FRFFSLGNLWSIVSSLATQRQAEGILNLIEAKWDDIVANMPLKICYPALEYEEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRRDLARRAVE VAEKRLSDDKWPEYYDTRTGRFIGKQSRLYQTWTIAGYLSSKMLLDCPEMASILICDED |
Full Sequence |
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Protein Sequence Length: 622 Download |
MAAAAISHLR RGAQRHALLC LSLPRRRFSS TAASPLAAAA RRLLSTTVDA GASSSGEHYK 60 PPPFEPFRAA TLTPSAPPLE SPPIEDEPPS SPPPPEEAAA SEAAHEQATL ACQEVELEGL 120 KAGVEAVKSR EESPEEKEAW WLLGRAVVNY CGSAVGTVAA NDPSTSQMLN YDQVFIRDFV 180 PSAIAFLLKG ESDIVKNFLL HTLQLQSWEK TVDCYSPGQG LMPASFKVRS VPLDGNSEAF 240 EEILDPDFGE SAIGRVAPVD SGLWWIILLR AYGKITGDYA LQERVDVQTG IRLILNLCLS 300 DGFDMFPTLL VTDGSCMIDR RMGIHGHPLE IQALFYSALR CAREMISVND GSKNLIRAIN 360 NRLSALSFHI REYYWVDMKK INEIYRYKTE EYSHDAINKF NIYPEQIPSW LADWIPVKGG 420 YLIGNLQPAH MDFRFFSLGN LWSIVSSLAT QRQAEGILNL IEAKWDDIVA NMPLKICYPA 480 LEYEEWRIIT GSDPKNTPWS YHNGGSWPTL LWQFTLACIK MGRRDLARRA VEVAEKRLSD 540 DKWPEYYDTR TGRFIGKQSR LYQTWTIAGY LSSKMLLDCP EMASILICDE DFELLEGCAC 600 SLNKSARIKC SRRAAKSQVL V* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3408 | GDB1 | 0.0001 | 487 | 575 | 92 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
pfam12899 | Glyco_hydro_100 | 0 | 138 | 580 | 443 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. | ||
PLN02703 | PLN02703 | 0 | 136 | 621 | 486 | + beta-fructofuranosidase | ||
PLN03005 | PLN03005 | 0 | 129 | 591 | 463 | + beta-fructofuranosidase | ||
PLN02973 | PLN02973 | 0 | 119 | 594 | 479 | + beta-fructofuranosidase |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN34188.1 | 0 | 66 | 618 | 98 | 624 | unknown [Zea mays] |
GenBank | EEC75120.1 | 0 | 1 | 618 | 1 | 625 | hypothetical protein OsI_11302 [Oryza sativa Indica Group] |
RefSeq | NP_001049936.1 | 0 | 1 | 621 | 1 | 628 | Os03g0314800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002280462.1 | 0 | 123 | 621 | 173 | 672 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002465359.1 | 0 | 1 | 621 | 1 | 626 | hypothetical protein SORBIDRAFT_01g037120 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO811217 | 496 | 128 | 622 | 0 |
HO779905 | 409 | 214 | 622 | 0 |
HO466454 | 471 | 137 | 607 | 0 |
GT033923 | 322 | 253 | 574 | 0 |
DV161952 | 319 | 209 | 527 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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