| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si034769m |
| Family | GT31 |
| Protein Properties | Length: 606 Molecular Weight: 66501 Isoelectric Point: 8.4121 |
| Chromosome | Chromosome/Scaffold: 9 Start: 8307303 End: 8313186 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT31 | 373 | 553 | 0 |
| ERMAARRSWMSSVRNSSSVVARFFVALNGRREVNEDLLKEADFFGDIVIVPFVDSYDLVVLKTIAICDYAARVVPAKYVMKCDDDTFVRLDSVMAEVKKV SDSKSLYLGNMNYYHRPLREGKWAVSYEEWPREEYPPYADGAGYIVSSDIANFVASEMEKGRLNLFKMEDVSMGMWVGRFN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 606 Download |
| MRRPRRVGVG GGLRPLLLLL PFAALLSVAT FSLHSPDRLV IDAPRQLSPT SRHVHRLAVS 60 SLDVPGAAPP LHGAAARAFR SGGRLLRDVL SSPSPSSWSS SSAPAPPPAG VVGATRCPAS 120 VTRSGAQLRG VGGGALLPLP CGLALGSHVT VVGAPRRAAG ATVAQFAVEL RGEGDGDAAP 180 RILHFNPRLR GDWSRRPVIE QNTRFRGQWG PALRCEGHRS RPEEETVDGL VKCEEWSGKV 240 RDTSEELKRL WLRNRIAGQK GRNCIDWPYP FMEDELFVLT LSAGLEGYHF HVDGKHVTSF 300 PYRVGFVLED ATILSVIGDI DVQSIVAGSL PTAHPSIVQR NLELLTELKA PPLAEENVEL 360 FIGILSAGNH FTERMAARRS WMSSVRNSSS VVARFFVALN GRREVNEDLL KEADFFGDIV 420 IVPFVDSYDL VVLKTIAICD YAARVVPAKY VMKCDDDTFV RLDSVMAEVK KVSDSKSLYL 480 GNMNYYHRPL REGKWAVSYE EWPREEYPPY ADGAGYIVSS DIANFVASEM EKGRLNLFKM 540 EDVSMGMWVG RFNSSGNSVA YVHSPRLCQS GCVDDYLTAH YQSPAQLVCL WEKLRQGRPQ 600 CCNAR* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01762 | Galactosyl_T | 2.0e-14 | 405 | 551 | 158 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| smart00908 | Gal-bind_lectin | 4.0e-15 | 147 | 325 | 179 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
| cd00070 | GLECT | 2.0e-17 | 147 | 326 | 180 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
| pfam00337 | Gal-bind_lectin | 1.0e-19 | 147 | 325 | 179 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| PLN03133 | PLN03133 | 3.0e-98 | 147 | 605 | 481 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAT77000.1 | 0 | 1 | 605 | 1 | 618 | putative Galactosyltransferase [Oryza sativa Japonica Group] |
| GenBank | EEC75984.1 | 0 | 1 | 605 | 1 | 618 | hypothetical protein OsI_13103 [Oryza sativa Indica Group] |
| RefSeq | NP_001050960.1 | 0 | 1 | 605 | 1 | 575 | Os03g0692500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001140783.1 | 0 | 202 | 605 | 2 | 409 | hypothetical protein LOC100272858 [Zea mays] |
| RefSeq | XP_002464057.1 | 0 | 1 | 605 | 1 | 569 | hypothetical protein SORBIDRAFT_01g011450 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2dyc_A | 0.004 | 138 | 335 | 21 | 157 | A Chain A, Crystal Structure Of The N-Terminal Domain Of Mouse Galectin-4 |
| PDB | 3i8t_A | 0.005 | 138 | 222 | 34 | 106 | A Chain A, N-Terminal Crd1 Domain Of Mouse Galectin-4 In Complex With Lactose |
