Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si034827m |
Family | GT8 |
Protein Properties | Length: 590 Molecular Weight: 68025.9 Isoelectric Point: 9.2374 |
Chromosome | Chromosome/Scaffold: 9 Start: 8429498 End: 8434739 |
Description | galacturonosyltransferase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 247 | 562 | 0 |
CLSMRLTIDYYLLSPEKRKFPNSENLENPDLYHYALFSDNVLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLLNPPGDATIHVENVDDFKWL NSSYCPVLKQLESAAMKEYYFKADRPKTLSAGSSNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQRDLTGLWEVDLNGNVNGAVETCGESF HRFDKYLNFSNPNISQNFDPNACGWAYGMNMFDLEEWKRKDITGIYHKWQNMNENRLLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPTIERSEIDN AAVIHYNGNMKPWLEI |
Full Sequence |
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Protein Sequence Length: 590 Download |
MAIRAGGSAL LALAVLLAAS SCLQARVDQL HHGRQVSDWS RKHNFELQNF SSSQMDDLHL 60 LGRPEEITRR KLRDRRTGVR KKMEVVQQDD EALVKLENTG IERSKAVDSA VLGKYSIWRR 120 ENENEKADSR VRQMRDQMIM ARIYSVLAKS RDKLDLYQEL LARLKESQRS LGEATADAEL 180 PKSASERIKA MSQVLSKARD LLYDCKAITH RLRAMLLSAD EQVRSLKKQS TFLSQLAAKT 240 IPNGIHCLSM RLTIDYYLLS PEKRKFPNSE NLENPDLYHY ALFSDNVLAA SVVVNSTIMN 300 AKEPEKHVFH LVTDKLNFGA MNMWFLLNPP GDATIHVENV DDFKWLNSSY CPVLKQLESA 360 AMKEYYFKAD RPKTLSAGSS NLKYRNPKYL SMLNHLRFYL PQVYPKLNKI LFLDDDIVVQ 420 RDLTGLWEVD LNGNVNGAVE TCGESFHRFD KYLNFSNPNI SQNFDPNACG WAYGMNMFDL 480 EEWKRKDITG IYHKWQNMNE NRLLWKLGTL PPGLLTFYKL THPLDKSWHV LGLGYNPTIE 540 RSEIDNAAVI HYNGNMKPWL EIAMTKYRPY WTKYINYEHP YIHGCKISQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02910 | PLN02910 | 0 | 28 | 589 | 562 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 88 | 587 | 504 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 127 | 588 | 467 | + Probable galacturonosyltransferase | ||
PLN02523 | PLN02523 | 0 | 128 | 585 | 479 | + galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 68 | 587 | 523 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN33451.1 | 0 | 1 | 589 | 1 | 590 | unknown [Zea mays] |
GenBank | EEC81302.1 | 0 | 9 | 589 | 11 | 588 | hypothetical protein OsI_24438 [Oryza sativa Indica Group] |
GenBank | EEC84934.1 | 0 | 83 | 589 | 189 | 695 | hypothetical protein OsI_32147 [Oryza sativa Indica Group] |
RefSeq | NP_001130678.1 | 0 | 1 | 589 | 1 | 588 | hypothetical protein LOC100191781 [Zea mays] |
RefSeq | XP_002466644.1 | 0 | 1 | 589 | 1 | 588 | hypothetical protein SORBIDRAFT_01g011560 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.0001 | 386 | 559 | 75 | 252 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
PDB | 1g9r_A | 0.0001 | 386 | 559 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.0004 | 386 | 559 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |