Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si034916m |
Family | AA1 |
Protein Properties | Length: 571 Molecular Weight: 62302.4 Isoelectric Point: 8.1571 |
Chromosome | Chromosome/Scaffold: 9 Start: 50127657 End: 50130626 |
Description | laccase 17 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 26 | 563 | 0 |
TRYYTFNVTLQKVTRLCTTRAIPTVNGKFPGPKIVTREGDRVVVKVVNSVKDNITIHWHGVRQLRTGWSDGPAYVTQCPIRTGQSYVYNFTITGQRGTLF WHAHVSWMRATLYGPIIILPKRGVPYPFPVKPYKEVPIIFGEWFNADPEAIIAQALKTGAGPNISDAFTINGLPGPLYNCSSKDTFKLKVLPGKWYLLRL INAALNDELFFSIANHTLTVVDVDAAYVKPFHTDVVLITPGQTTNVLLRAEPDAGCPAATHLMLARPYGTGQPGTFDNTTVAAVLEYAPPGHIKSLPLFR PSLPALNDTAFAANYSARLRSLATPDYPANVPRGVDRSFFFAVGLGTNPCPANQTCQGPNGSMFTASMNNVSFDMPTTALLQAHYNNIAGVYTTDFPVAP LEPFNYTGTPPNNTNVSNGTKVVVLQYNTSVEVVLQDTSILGAESHPLHLHGFDFFVVGQGFGNYDSSKDPAKFNLVDPVQRNTVGVPAGGWVAIRFFAD NPGVWFMHCHLEVHTSWGLKMAWVVNDGPLPEQKLMPP |
Full Sequence |
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Protein Sequence Length: 571 Download |
MEAPCLALLL FFGTLLVLPQ SSHGATRYYT FNVTLQKVTR LCTTRAIPTV NGKFPGPKIV 60 TREGDRVVVK VVNSVKDNIT IHWHGVRQLR TGWSDGPAYV TQCPIRTGQS YVYNFTITGQ 120 RGTLFWHAHV SWMRATLYGP IIILPKRGVP YPFPVKPYKE VPIIFGEWFN ADPEAIIAQA 180 LKTGAGPNIS DAFTINGLPG PLYNCSSKDT FKLKVLPGKW YLLRLINAAL NDELFFSIAN 240 HTLTVVDVDA AYVKPFHTDV VLITPGQTTN VLLRAEPDAG CPAATHLMLA RPYGTGQPGT 300 FDNTTVAAVL EYAPPGHIKS LPLFRPSLPA LNDTAFAANY SARLRSLATP DYPANVPRGV 360 DRSFFFAVGL GTNPCPANQT CQGPNGSMFT ASMNNVSFDM PTTALLQAHY NNIAGVYTTD 420 FPVAPLEPFN YTGTPPNNTN VSNGTKVVVL QYNTSVEVVL QDTSILGAES HPLHLHGFDF 480 FVVGQGFGNY DSSKDPAKFN LVDPVQRNTV GVPAGGWVAI RFFADNPGVW FMHCHLEVHT 540 SWGLKMAWVV NDGPLPEQKL MPPPADLPMC * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 4.0e-44 | 32 | 148 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 4.0e-60 | 20 | 560 | 577 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 2.0e-77 | 20 | 544 | 555 | + oxidoreductase | ||
TIGR03388 | ascorbase | 8.0e-82 | 26 | 544 | 551 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 24 | 570 | 548 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001049699.1 | 0 | 24 | 570 | 29 | 578 | Os03g0273200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001131665.1 | 0 | 6 | 570 | 10 | 576 | hypothetical protein LOC100193025 [Zea mays] |
RefSeq | XP_002299296.1 | 0 | 6 | 570 | 12 | 581 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002465485.1 | 0 | 1 | 570 | 1 | 576 | hypothetical protein SORBIDRAFT_01g039690 [Sorghum bicolor] |
RefSeq | XP_002531824.1 | 0 | 9 | 570 | 17 | 576 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 27 | 544 | 4 | 517 | B Chain B, Structural Basis For Specific Recognition Of Reelin By Its Receptors |
PDB | 1asq_A | 0 | 27 | 544 | 4 | 517 | B Chain B, Structural Basis For Specific Recognition Of Reelin By Its Receptors |
PDB | 1asp_B | 0 | 27 | 544 | 4 | 517 | B Chain B, Structural Basis For Specific Recognition Of Reelin By Its Receptors |
PDB | 1asp_A | 0 | 27 | 544 | 4 | 517 | B Chain B, Structural Basis For Specific Recognition Of Reelin By Its Receptors |
PDB | 1aso_B | 0 | 27 | 544 | 4 | 517 | B Chain B, Structural Basis For Specific Recognition Of Reelin By Its Receptors |