Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si035361m |
Family | CBM43 |
Protein Properties | Length: 495 Molecular Weight: 53590.7 Isoelectric Point: 4.657 |
Chromosome | Chromosome/Scaffold: 9 Start: 3491528 End: 3494150 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 375 | 456 | 1.1e-24 |
WCVVNTESPNMDKLADNINFACTFADCTALGYGSTCGGMDSNGNASYAFNAFFQMKDQADEACDFQGLARPTQTDPSTNTCN | |||
GH17 | 32 | 352 | 0 |
LGMNWGTQATHQLPPKIVVQMLKDNGIKKVKLFDADQSTLSALAGTGIEVMVAIPNVLLDRITDYDTAKEWVRHNVSRYNFDGGVTIKYVAVGNEPFLAA YNNTFDKVTFPALQNIQNALDEAGLGDTIKATVPLNADVYMSPTDNPVPSAGRWRPDIADLMTQMVQFLSNHSAPFTVNIYPFISLFLNDNFPVDFAFFD GGATPVLDNGVQYTNVFDANFDTLVAALKASGHGDLPVIVGEVGWPTDGDKHATNVYAQRFYNGLLKRLAANAGTPVRPNQYIEVYLFGLLDEDIKSVAP GNFERHWGILRYDGQPKYPMD |
Full Sequence |
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Protein Sequence Length: 495 Download |
MENLAALRPW LCLLAAMAAA ASWSGVARVE ALGMNWGTQA THQLPPKIVV QMLKDNGIKK 60 VKLFDADQST LSALAGTGIE VMVAIPNVLL DRITDYDTAK EWVRHNVSRY NFDGGVTIKY 120 VAVGNEPFLA AYNNTFDKVT FPALQNIQNA LDEAGLGDTI KATVPLNADV YMSPTDNPVP 180 SAGRWRPDIA DLMTQMVQFL SNHSAPFTVN IYPFISLFLN DNFPVDFAFF DGGATPVLDN 240 GVQYTNVFDA NFDTLVAALK ASGHGDLPVI VGEVGWPTDG DKHATNVYAQ RFYNGLLKRL 300 AANAGTPVRP NQYIEVYLFG LLDEDIKSVA PGNFERHWGI LRYDGQPKYP MDLSGQGQNA 360 MLVPAQGVEY LPRTWCVVNT ESPNMDKLAD NINFACTFAD CTALGYGSTC GGMDSNGNAS 420 YAFNAFFQMK DQADEACDFQ GLARPTQTDP STNTCNFTIQ IATTSAAAGH RRPIGVAAAA 480 AVLLFLAQLT ILLH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0004 | 226 | 344 | 119 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-18 | 374 | 443 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-31 | 374 | 457 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 5.0e-70 | 32 | 352 | 323 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG29689.1 | 0 | 31 | 467 | 20 | 458 | glucan endo-1,3-beta-glucosidase 5 precursor [Zea mays] |
RefSeq | NP_001051526.1 | 0 | 30 | 472 | 32 | 472 | Os03g0792800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130924.1 | 0 | 31 | 467 | 21 | 459 | hypothetical protein LOC100192029 [Zea mays] |
RefSeq | XP_002459388.1 | 0 | 31 | 467 | 28 | 465 | hypothetical protein SORBIDRAFT_02g003910 [Sorghum bicolor] |
RefSeq | XP_002463758.1 | 0 | 4 | 472 | 5 | 473 | hypothetical protein SORBIDRAFT_01g005610 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 32 | 354 | 2 | 316 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
PDB | 3f55_C | 0 | 32 | 354 | 2 | 316 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
PDB | 3f55_B | 0 | 32 | 354 | 2 | 316 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
PDB | 3f55_A | 0 | 32 | 354 | 2 | 316 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
PDB | 3em5_D | 0 | 32 | 354 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |