Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si035430m |
Family | CBM43 |
Protein Properties | Length: 484 Molecular Weight: 49705.4 Isoelectric Point: 5.0391 |
Chromosome | Chromosome/Scaffold: 9 Start: 9431255 End: 9433211 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 380 | 460 | 5.4e-31 |
WCVARDGATDADLQADLDYACAQVGVDCGAIQPGGACFEPNTVRAHAAYAMNQLYQAAGRHPWNCDFRASATLTSDNPSKC | |||
GH17 | 37 | 354 | 0 |
IGVNYGEVADNLPPPEETARLLKSTAISKVRLYGVDAGLIRALAGSNISVVVGVANGDIPSLAADPAAASRWLAANVLPFVPATSISAVAVGNEVLESGD ASLAAALLPAMQNLRAAAAAAGGAAAGIRFSTVNTMGVMAQSDPPSTGAFHPDIAPQLQGILGFLSRTGAPFMINPYPWFAYQSDPRAETLAFCLFQPNA GRVDAGSKIKYTNMFDAQLDAVKSAMVRAGYGNVDIVVAETGWPTKGDAGEPGATVENARAYVSNLVSHLRSGAGTPLVPGKPVETYLFALYDEDLKPGP ESERSFGLYHTDLSAAYD |
Full Sequence |
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Protein Sequence Length: 484 Download |
MRRIPMAAAA RKPVSALLLP IWLFCLLVCS SSAQPYIGVN YGEVADNLPP PEETARLLKS 60 TAISKVRLYG VDAGLIRALA GSNISVVVGV ANGDIPSLAA DPAAASRWLA ANVLPFVPAT 120 SISAVAVGNE VLESGDASLA AALLPAMQNL RAAAAAAGGA AAGIRFSTVN TMGVMAQSDP 180 PSTGAFHPDI APQLQGILGF LSRTGAPFMI NPYPWFAYQS DPRAETLAFC LFQPNAGRVD 240 AGSKIKYTNM FDAQLDAVKS AMVRAGYGNV DIVVAETGWP TKGDAGEPGA TVENARAYVS 300 NLVSHLRSGA GTPLVPGKPV ETYLFALYDE DLKPGPESER SFGLYHTDLS AAYDAGLTSS 360 GAAAGSPSAG GGPAKASGGW CVARDGATDA DLQADLDYAC AQVGVDCGAI QPGGACFEPN 420 TVRAHAAYAM NQLYQAAGRH PWNCDFRASA TLTSDNPSKC TAPIPTALFC SITPVSAYMA 480 VVT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 7.0e-13 | 64 | 348 | 292 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-21 | 380 | 451 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-35 | 380 | 458 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 5.0e-94 | 37 | 354 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY91326.1 | 0 | 6 | 458 | 1 | 454 | hypothetical protein OsI_12942 [Oryza sativa Indica Group] |
RefSeq | NP_001050864.1 | 0 | 6 | 458 | 1 | 454 | Os03g0669300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148381.1 | 0 | 18 | 458 | 12 | 450 | glucan endo-1,3-beta-glucosidase 7 [Zea mays] |
RefSeq | XP_002466692.1 | 0 | 21 | 458 | 20 | 464 | hypothetical protein SORBIDRAFT_01g012380 [Sorghum bicolor] |
RefSeq | XP_002509479.1 | 0 | 31 | 458 | 22 | 449 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 37 | 358 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_C | 0 | 37 | 358 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_B | 0 | 37 | 358 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_A | 0 | 37 | 358 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3em5_D | 0 | 37 | 358 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |