Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si035445m |
Family | GH5 |
Protein Properties | Length: 481 Molecular Weight: 52383.3 Isoelectric Point: 8.8202 |
Chromosome | Chromosome/Scaffold: 9 Start: 1179023 End: 1181193 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 59 | 386 | 5.5e-35 |
GTKTVYFSGFNAYWLMLVASDPARRAKVVAAFRQASDHGLNLARTWAFSDGGETPLQVSPGVYDEAMFQGLDFVIAEARRHGIYLLLCLVNNFHDFGGKR QYVAWAREAGHGGLATADDFFNSTVVKGYYKDHVKAVLTRVNTVTGVAYREDPTILGWELMNEPRCDADPTGAMVQAWVEEMAPYVKSIDGDKHLVTAGL EGFYGAGAHESKDLNPWGIYYGTNYVGTHRAAGVDFATIHLYPDVWLWGSGAAAKLAFLRNWTRSHAAATELYLGKPLLVTEYGKFLWEGVAGANRTQRD RFLDLVLDSIYDSAAEGGPLVGGAFWQL |
Full Sequence |
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Protein Sequence Length: 481 Download |
MARPRRPGVL PATLLLLFLA ASAAAPWRQY GLAAVAAAPD GGGGFVGVNG TQFVMGSGGT 60 KTVYFSGFNA YWLMLVASDP ARRAKVVAAF RQASDHGLNL ARTWAFSDGG ETPLQVSPGV 120 YDEAMFQGLD FVIAEARRHG IYLLLCLVNN FHDFGGKRQY VAWAREAGHG GLATADDFFN 180 STVVKGYYKD HVKAVLTRVN TVTGVAYRED PTILGWELMN EPRCDADPTG AMVQAWVEEM 240 APYVKSIDGD KHLVTAGLEG FYGAGAHESK DLNPWGIYYG TNYVGTHRAA GVDFATIHLY 300 PDVWLWGSGA AAKLAFLRNW TRSHAAATEL YLGKPLLVTE YGKFLWEGVA GANRTQRDRF 360 LDLVLDSIYD SAAEGGPLVG GAFWQLLDPG MDTLRDGYEI ILPEDRHAAG IIGNHSRQLA 420 QLNGQDVDAV RRRRRRSARS RKVHVGSSGR SSSSDTRQLH MLLVRFISLF RSVSSLFSSV 480 * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2730 | BglC | 0.001 | 95 | 223 | 133 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
pfam00150 | Cellulase | 2.0e-7 | 88 | 342 | 257 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 7.0e-23 | 63 | 301 | 242 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL79758.1 | 0 | 45 | 477 | 1 | 432 | AC096687_22 putative endohydrolase [Oryza sativa Japonica Group] |
GenBank | EAY92423.1 | 0 | 46 | 470 | 34 | 458 | hypothetical protein OsI_14157 [Oryza sativa Indica Group] |
GenBank | EEC76450.1 | 0 | 45 | 477 | 1 | 433 | hypothetical protein OsI_14158 [Oryza sativa Indica Group] |
RefSeq | NP_001051777.1 | 0 | 26 | 477 | 12 | 454 | Os03g0828500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002463596.1 | 0 | 52 | 428 | 47 | 424 | hypothetical protein SORBIDRAFT_01g002630 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 42 | 422 | 3 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 8.40779e-45 | 61 | 396 | 25 | 352 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 8.40779e-45 | 61 | 396 | 25 | 352 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 8.40779e-45 | 61 | 396 | 25 | 352 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 8.40779e-45 | 61 | 396 | 25 | 352 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |