CAZyme Information

Basic Information
SpeciesSetaria italica
Cazyme IDSi035531m
FamilyGH43
Protein PropertiesLength: 468 Molecular Weight: 53509.5 Isoelectric Point: 6.9931
ChromosomeChromosome/Scaffold: 9 Start: 53645737 End: 53648791
DescriptionArabinanase/levansucrase/invertase
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH431613864e-35
  TKTYFWYGENKDGKTYKAHSKGADRVDIVGVSCYSSKDLWTWKNEGVVLRGEEKNVTHDLHKSNVLERPKVIYNDWTGKYVMWMHIDDANYTKASVGVAV
  SDSPTGPFTYLYSKRPHDCESRDMTIFKDDDGKAYLIYSSEDNSELHIGPLTDDYLDVTDVMRRFLIAQHREAPALFKHEGTYYMVTSGCTGWAPNTALA
  HAATSVMGPWETLGNPCVGGNEVFRS
Full Sequence
Protein Sequence     Length: 468     Download
MGMRSRHPKA LGLRCYPASH RSLTLVLWSL AALVVVVNFH LIIIHKEEDE SMSTHEIRRS    60
IMRELEAVEE EKFRLSPPRS RRNPRAVRRK GERKPPTVVD EFLDESSAVH DMFFPESNMA    120
VDPINGRNDS MYFYYPGRVW LDTDGKPIQA HGGGVLYDKK TKTYFWYGEN KDGKTYKAHS    180
KGADRVDIVG VSCYSSKDLW TWKNEGVVLR GEEKNVTHDL HKSNVLERPK VIYNDWTGKY    240
VMWMHIDDAN YTKASVGVAV SDSPTGPFTY LYSKRPHDCE SRDMTIFKDD DGKAYLIYSS    300
EDNSELHIGP LTDDYLDVTD VMRRFLIAQH REAPALFKHE GTYYMVTSGC TGWAPNTALA    360
HAATSVMGPW ETLGNPCVGG NEVFRSTTFF SQSTFVLPVP GLPGSFIFMA DRWNPSDLRD    420
SRYVWLPLTI GGVPDEAADY SFMFPLWSRV SIYWHKQWRL PEGWRDS* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd09004GH43_bXyl3.0e-22192375195+
cd08990GH43_AXH_like3.0e-22193371193+
cd08978GH_F2.0e-43151430291+
cd08985GH43_61.0e-126148430284+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACG45031.1014671467glycosyl hydrolase, family 43 protein [Zea mays]
GenBankEEE53089.101467299764hypothetical protein OsJ_35850 [Oryza sativa Japonica Group]
RefSeqNP_001066630.1014671466Os12g0406100 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001151925.1014671467glycosyl hydrolase, family 43 protein [Zea mays]
RefSeqXP_002468324.1014671467hypothetical protein SORBIDRAFT_01g043810 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3vt2_F013745245346A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant
PDB3vt2_E013745245346A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant
PDB3vt2_D013745245346A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant
PDB3vt2_C013745245346A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant
PDB3vt2_B013745245346A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant
Transmembrane Domains
StartEnd
2244
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GO8017533011684680
JG918498278903670
JG8646842761824570
GO8561533321344650
JG9370722511343840
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_060_00007.3Aquca_060_00007.1Aquca_060_00007.2
Arabidopsis lyrata906305332819
Arabidopsis thalianaAT5G67540.2AT5G67540.1AT3G49880.1
Brachypodium distachyonBradi2g50980.2Bradi1g71160.1Bradi2g50980.1
Brassica rapaBra024441Bra029980Bra036036
Capsella rubellaCarubv10027885mCarubv10019437m
Citrus clementinaCiclev10025553mCiclev10025552mCiclev10025561m
Citrus sinensisorange1.1g011114morange1.1g012300morange1.1g012453m
Cucumis sativusCucsa.366970.1Cucsa.366990.1
Eucalyptus grandisEucgr.I00703.2Eucgr.I00703.1Eucgr.H02307.1
Fragaria vescamrna05759.1-v1.0-hybrid
Glycine maxGlyma05g22470.3Glyma17g17390.3Glyma17g17390.2Glyma17g17390.1Glyma05g22470.6
Glyma05g22470.5Glyma05g22470.4Glyma05g22470.2Glyma01g40190.1Glyma11g05100.1
Gossypium raimondiiGorai.011G214500.1Gorai.008G083400.1Gorai.003G030500.1Gorai.003G030500.2
Linum usitatissimumLus10011543Lus10019280
Malus domesticaMDP0000248963MDP0000503275MDP0000406084
Manihot esculentacassava4.1_032973mcassava4.1_007150mcassava4.1_007066m
Medicago truncatulaMedtr5g015460.1Medtr4g097110.1
Mimulus guttatusmgv1a018781mmgv1a005746m
Oryza sativaLOC_Os12g21789.1LOC_Os12g21789.2LOC_Os01g65720.1
Panicum virgatumPavirv00010178mPavirv00067870mPavirv00058950mPavirv00044467m
Physcomitrella patensPp1s410_9V6.1Pp1s16_243V6.1
Phaseolus vulgarisPhvul.003G234900.1Phvul.002G010600.1
Picea abiesMA_181765g0010
Populus trichocarpaPotri.005G148800.1Potri.005G148800.2
Prunus persicappa005306m
Ricinus communis48021.m00001434138.m00001529661.m000924
Setaria italicaSi001388m
Selaginella moellendorffii44066110234
Sorghum bicolorSb03g041630.1Sb01g043810.1
Thellungiella halophilaThhalv10004148mThhalv10010347m
Vitis viniferaGSVIVT01000105001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny