Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si035582m |
Family | CBM43 |
Protein Properties | Length: 463 Molecular Weight: 47237.9 Isoelectric Point: 4.5332 |
Chromosome | Chromosome/Scaffold: 9 Start: 9430426 End: 9433165 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 373 | 455 | 1.3e-32 |
WCVARDGATDADLQADLDYACAQVGVDCGAIQPGGACFEPNTVRAHAAYAMNQLYQAAGRHPWNCDFRASATLTSDNPSYGAC | |||
GH17 | 30 | 347 | 0 |
IGVNYGEVADNLPPPEETARLLKSTAISKVRLYGVDAGLIRALAGSNISVVVGVANGDIPSLAADPAAASRWLAANVLPFVPATSISAVAVGNEVLESGD ASLAAALLPAMQNLRAAAAAAGGAAAGIRFSTVNTMGVMAQSDPPSTGAFHPDIAPQLQGILGFLSRTGAPFMINPYPWFAYQSDPRAETLAFCLFQPNA GRVDAGSKIKYTNMFDAQLDAVKSAMVRAGYGNVDIVVAETGWPTKGDAGEPGATVENARAYVSNLVSHLRSGAGTPLVPGKPVETYLFALYDEDLKPGP ESERSFGLYHTDLSAAYD |
Full Sequence |
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Protein Sequence Length: 463 Download |
MPFLSFWIEL GTDGGAGGFP CARAGAQPYI GVNYGEVADN LPPPEETARL LKSTAISKVR 60 LYGVDAGLIR ALAGSNISVV VGVANGDIPS LAADPAAASR WLAANVLPFV PATSISAVAV 120 GNEVLESGDA SLAAALLPAM QNLRAAAAAA GGAAAGIRFS TVNTMGVMAQ SDPPSTGAFH 180 PDIAPQLQGI LGFLSRTGAP FMINPYPWFA YQSDPRAETL AFCLFQPNAG RVDAGSKIKY 240 TNMFDAQLDA VKSAMVRAGY GNVDIVVAET GWPTKGDAGE PGATVENARA YVSNLVSHLR 300 SGAGTPLVPG KPVETYLFAL YDEDLKPGPE SERSFGLYHT DLSAAYDAGL TSSGAAAGSP 360 SAGGGPAKAS GGWCVARDGA TDADLQADLD YACAQVGVDC GAIQPGGACF EPNTVRAHAA 420 YAMNQLYQAA GRHPWNCDFR ASATLTSDNP SYGACVYTGG GQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 9.0e-13 | 57 | 341 | 292 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 4.0e-21 | 373 | 444 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-38 | 373 | 457 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-93 | 30 | 347 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN26761.1 | 0 | 140 | 462 | 1 | 323 | unknown [Zea mays] |
GenBank | EAY91326.1 | 0 | 26 | 460 | 25 | 463 | hypothetical protein OsI_12942 [Oryza sativa Indica Group] |
RefSeq | NP_001050864.1 | 0 | 26 | 460 | 25 | 463 | Os03g0669300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148381.1 | 0 | 26 | 462 | 25 | 461 | glucan endo-1,3-beta-glucosidase 7 [Zea mays] |
RefSeq | XP_002466692.1 | 0 | 22 | 462 | 29 | 475 | hypothetical protein SORBIDRAFT_01g012380 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 30 | 351 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_C | 0 | 30 | 351 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_B | 0 | 30 | 351 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_A | 0 | 30 | 351 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3em5_D | 0 | 30 | 351 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO781349 | 418 | 48 | 463 | 0 |
HO782823 | 440 | 37 | 460 | 0 |
HO796302 | 423 | 43 | 463 | 0 |
EE163333 | 274 | 157 | 430 | 0 |
EE152766 | 266 | 157 | 422 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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