Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si035613m |
Family | GH3 |
Protein Properties | Length: 458 Molecular Weight: 49817.8 Isoelectric Point: 6.6731 |
Chromosome | Chromosome/Scaffold: 9 Start: 5524410 End: 5526652 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 5 | 172 | 0 |
QVCRDPRWGRCYESYSEDPKVVQSMTSLISGLQGEVPANDVGRPYVAGSKNVAACAKHYVGDGGTHQGINENNTIIDTHGLLSIHMPPYYNSIIRGVSTV MVSYSSWNGVKMHANHFLVTDFLKNKLKFRGFVISDWEGIDRITSPPHANYSYSIEAGVGAGIDMIMV |
Full Sequence |
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Protein Sequence Length: 458 Download |
MIFAQVCRDP RWGRCYESYS EDPKVVQSMT SLISGLQGEV PANDVGRPYV AGSKNVAACA 60 KHYVGDGGTH QGINENNTII DTHGLLSIHM PPYYNSIIRG VSTVMVSYSS WNGVKMHANH 120 FLVTDFLKNK LKFRGFVISD WEGIDRITSP PHANYSYSIE AGVGAGIDMI MVPFRYTEFI 180 DDLTAQVQNK VIPMSRIDDA VYRILRVKFS MGLFENPYPD TSLAGELGKQ EHRDLAREAV 240 RKSLVLLKNG KSSYSPLLPL PKKAGKILVA GSHADNLGNQ CGGWTITWQG QPGNNITAGT 300 TILEGIKATI DPSTQVVYSE NPDSTVLADK YDYAVVVVGE PPYAETFGDN LNLTIPAPGP 360 SVIQSVCKAT KCVVVLISGR PLVVEPYLGD MDAFVAAWLP GSEGQGVADV LFGDYGFTGK 420 LSRTWFKSVD QLPMSVGDKH YDPLFPFGFG LTTKGTK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 7.0e-38 | 8 | 443 | 470 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 6.0e-56 | 244 | 452 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 5.0e-56 | 6 | 207 | 204 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 7.0e-61 | 6 | 312 | 312 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
PRK15098 | PRK15098 | 4.0e-63 | 1 | 452 | 527 | + beta-D-glucoside glucohydrolase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC49170.1 | 0 | 6 | 457 | 172 | 624 | beta-D-glucan exohydrolase, isoenzyme ExoII [Hordeum vulgare subsp. vulgare] |
GenBank | AAF79936.1 | 0 | 6 | 457 | 172 | 622 | exoglucanase precursor [Zea mays] |
GenBank | AAM13694.1 | 0 | 6 | 457 | 172 | 624 | beta-D-glucan exohydrolase [Triticum aestivum] |
RefSeq | NP_001051275.1 | 0 | 6 | 454 | 172 | 621 | Os03g0749300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130296.1 | 0 | 6 | 457 | 172 | 622 | exoglucanase1 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 6 | 457 | 150 | 603 | A Chain A, Crystal Structure Of A Putative Alpha-Rhamnosidase From Bacteroides Thetaiotaomicron |
PDB | 1iex_A | 0 | 6 | 457 | 150 | 603 | A Chain A, Crystal Structure Of A Putative Alpha-Rhamnosidase From Bacteroides Thetaiotaomicron |
PDB | 1iew_A | 0 | 6 | 457 | 150 | 603 | A Chain A, Crystal Structure Of A Putative Alpha-Rhamnosidase From Bacteroides Thetaiotaomicron |
PDB | 1iev_A | 0 | 6 | 457 | 150 | 603 | A Chain A, Crystal Structure Of A Putative Alpha-Rhamnosidase From Bacteroides Thetaiotaomicron |
PDB | 1ieq_A | 0 | 6 | 457 | 150 | 603 | A Chain A, Crystal Structure Of A Putative Alpha-Rhamnosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CB683655 | 280 | 19 | 298 | 0 |
DT642729 | 281 | 174 | 454 | 0 |
HO213475 | 280 | 38 | 317 | 0 |
EE175429 | 261 | 6 | 266 | 0 |
CB670785 | 273 | 8 | 280 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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