Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si035755m |
Family | GH17 |
Protein Properties | Length: 440 Molecular Weight: 45702.1 Isoelectric Point: 8.1717 |
Chromosome | Chromosome/Scaffold: 9 Start: 51318037 End: 51320356 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 47 | 370 | 0 |
VGINYGRVGNNLPPPQSVLPLLEGLGIGRVRMYDADPAVLRAFARTGVELVVGVPDECLAAVADPGGAARWLKENLVPFLPDTKIAVLTVGNEVLTGSNS SSLSRVLLPAMQSLHGAVGALDLDKQITVTTAHNLGVLGTSYPPSAGAFRKDLLPYLCPILDYHARTGSPFLVNAYPYFAYSGDPKGVQLDYALLEPGYP GVPDPNSRLHYPNLLVAQVDAVYHAIATANAAASRVVEVRVSETGWPSAGAANETGATPQNAARYNSNAMRLVAEGKGTPLKPGVPLRAYVFALFNENLK PGLASERYYGLFKPDGTPAYELSF |
Full Sequence |
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Protein Sequence Length: 440 Download |
MAPCRLLRVG WGLQPLCASR LAAALCAAVV VALALAPASD ATSASLVGIN YGRVGNNLPP 60 PQSVLPLLEG LGIGRVRMYD ADPAVLRAFA RTGVELVVGV PDECLAAVAD PGGAARWLKE 120 NLVPFLPDTK IAVLTVGNEV LTGSNSSSLS RVLLPAMQSL HGAVGALDLD KQITVTTAHN 180 LGVLGTSYPP SAGAFRKDLL PYLCPILDYH ARTGSPFLVN AYPYFAYSGD PKGVQLDYAL 240 LEPGYPGVPD PNSRLHYPNL LVAQVDAVYH AIATANAAAS RVVEVRVSET GWPSAGAANE 300 TGATPQNAAR YNSNAMRLVA EGKGTPLKPG VPLRAYVFAL FNENLKPGLA SERYYGLFKP 360 DGTPAYELSF KLPRDNSTFG HGGGGFGGNG NGNSGYISGG GNSNGYYDIS ASTRDPPGRW 420 RMWAQAAVAG AAAVLMVAA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 4.0e-92 | 47 | 370 | 325 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF85320.1 | 0 | 1 | 437 | 1 | 442 | unknown [Zea mays] |
GenBank | ACF88366.1 | 0 | 1 | 437 | 1 | 441 | unknown [Zea mays] |
GenBank | EEC83592.1 | 0 | 3 | 439 | 4 | 430 | hypothetical protein OsI_29271 [Oryza sativa Indica Group] |
RefSeq | NP_001049543.1 | 0 | 3 | 439 | 4 | 430 | Os03g0246100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001150602.1 | 0 | 1 | 437 | 1 | 442 | LOC100284235 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 47 | 370 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 47 | 370 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 47 | 370 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 47 | 370 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 47 | 370 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV535193 | 266 | 47 | 312 | 0 |
DY687968 | 251 | 66 | 316 | 0 |
DV511793 | 273 | 1 | 273 | 0 |
DV174952 | 273 | 1 | 273 | 0 |
DT943240 | 273 | 1 | 273 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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