y
Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si035791m |
Family | GH17 |
Protein Properties | Length: 433 Molecular Weight: 44731.9 Isoelectric Point: 5.1278 |
Chromosome | Chromosome/Scaffold: 9 Start: 6917760 End: 6920808 |
Description | Glycosyl hydrolase family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 29 | 340 | 0 |
IGINYGDVADNLPPPSSTARLLQSTTISKVRLYGTDPAVVSAFAGTGISLLLGATNGDIANLASSPAAASAWVAAHIPSSSPAVSTVSVGNEVLFADASL ASQLVPAMQNLYDALPPNSSVKVSTVNAMDVLASSDPPSSGAFKPELSATLDPLLAFLSKTGSPFLINPYPYFAYLSDPRPETLAFCLFQPNAGRPDAGS GLTYTNMFDAMVDAVRAALDAKGYKDVEIVVAETGWPHKGDTDEAGATVENARAFVSGLVSHLRSLAGTPRAPGKSVETYIFAVYDEDLKPGKASERYFG LFQTSLTETYPT |
Full Sequence |
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Protein Sequence Length: 433 Download |
MAERRWIMLA LLGVIQLLRL PSVAPQSFIG INYGDVADNL PPPSSTARLL QSTTISKVRL 60 YGTDPAVVSA FAGTGISLLL GATNGDIANL ASSPAAASAW VAAHIPSSSP AVSTVSVGNE 120 VLFADASLAS QLVPAMQNLY DALPPNSSVK VSTVNAMDVL ASSDPPSSGA FKPELSATLD 180 PLLAFLSKTG SPFLINPYPY FAYLSDPRPE TLAFCLFQPN AGRPDAGSGL TYTNMFDAMV 240 DAVRAALDAK GYKDVEIVVA ETGWPHKGDT DEAGATVENA RAFVSGLVSH LRSLAGTPRA 300 PGKSVETYIF AVYDEDLKPG KASERYFGLF QTSLTETYPT GLLRNGTAGL GPAMAPAPAP 360 TSVQPPPALP TPQVTPAPPG SAAVAGPSGL CAPGTATARV ACTHHNAAES SRTFSVLTII 420 AGFWFTALQM LI* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 6.0e-8 | 27 | 333 | 320 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 5.0e-84 | 29 | 339 | 316 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEE59830.1 | 0 | 1 | 428 | 1 | 430 | hypothetical protein OsJ_12394 [Oryza sativa Japonica Group] |
RefSeq | NP_001051111.1 | 0 | 1 | 428 | 1 | 446 | Os03g0722500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147326.1 | 0 | 3 | 373 | 4 | 365 | LOC100280934 [Zea mays] |
RefSeq | NP_001150853.1 | 0 | 19 | 412 | 21 | 422 | glucan endo-1,3-beta-glucosidase 7 [Zea mays] |
RefSeq | XP_002466550.1 | 0 | 20 | 432 | 23 | 445 | hypothetical protein SORBIDRAFT_01g009770 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 29 | 331 | 3 | 303 | A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase |
PDB | 3ur8_A | 0 | 29 | 331 | 3 | 303 | A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase |
PDB | 3ur7_B | 0 | 29 | 331 | 3 | 303 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 29 | 331 | 3 | 303 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 0 | 29 | 331 | 3 | 303 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |