Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si035846m |
Family | GT14 |
Protein Properties | Length: 423 Molecular Weight: 46228 Isoelectric Point: 7.4099 |
Chromosome | Chromosome/Scaffold: 9 Start: 56321926 End: 56327747 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 79 | 332 | 0 |
LAFLLTGSAGDADRLQRLLLATYHPRNTYLLLLDRAASPADREWLARKARAAPGHDNVHVVGDPGFANPRGASALAATLHGAALLLRIGQGWDWFVHLDA ADYPLVTPDDLLHVLSYLPKDLNFIQHTSYIGWKESRQIRPIIVDPGLYLSSRNDIFYATQKRDLPNAYKLFTGSSSVILSRKFIEYCIVGMDNLPRTLL MYYTNMPLPHRKYFQTVLCNSPEFNRTVVNHDLHYSTWDAPSKNEPRLLTMADV |
Full Sequence |
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Protein Sequence Length: 423 Download |
MQPAAPAAPS ALPLSVFPKD SRPLPCLLLA SLLLLLLLHL SSSSSSPAPS PPPPPPPRLA 60 PLPTTAAAVS SAGPAPPTLA FLLTGSAGDA DRLQRLLLAT YHPRNTYLLL LDRAASPADR 120 EWLARKARAA PGHDNVHVVG DPGFANPRGA SALAATLHGA ALLLRIGQGW DWFVHLDAAD 180 YPLVTPDDLL HVLSYLPKDL NFIQHTSYIG WKESRQIRPI IVDPGLYLSS RNDIFYATQK 240 RDLPNAYKLF TGSSSVILSR KFIEYCIVGM DNLPRTLLMY YTNMPLPHRK YFQTVLCNSP 300 EFNRTVVNHD LHYSTWDAPS KNEPRLLTMA DVENMTESGA AFGTRFPKDD PVLDHIDAEI 360 LHRLPGELVT GGWCIGVGHD SPCDVSGNLD VLRPGPAATK VAKFLAERLS YRSFYSQQCI 420 WD* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 7.0e-52 | 79 | 336 | 262 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 5.0e-118 | 80 | 419 | 344 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAO17353.1 | 0 | 1 | 422 | 1 | 417 | Hypothetical protein [Oryza sativa Japonica Group] |
RefSeq | XP_002282998.1 | 0 | 70 | 420 | 77 | 430 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299292.1 | 0 | 34 | 420 | 35 | 426 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002468516.1 | 0 | 1 | 422 | 1 | 417 | hypothetical protein SORBIDRAFT_01g047240 [Sorghum bicolor] |
RefSeq | XP_002518166.1 | 0 | 55 | 422 | 66 | 438 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00001 | 91 | 277 | 97 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00001 | 91 | 277 | 97 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00001 | 91 | 277 | 97 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00001 | 91 | 277 | 97 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.00002 | 91 | 277 | 97 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |