Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si036091m |
Family | GT47 |
Protein Properties | Length: 390 Molecular Weight: 44673.6 Isoelectric Point: 6.4283 |
Chromosome | Chromosome/Scaffold: 9 Start: 56348052 End: 56349958 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 2 | 269 | 0 |
KQYECMTKDSSIAAAVFVPFYAGFDIARYLWGYNISTRDAASLDLVDWLMKKPEWNVMGGRDHFLVAGRITWDFRRLTEEESDWGSKLLFLPAAKNMSML VVESSPWNSNDFGIPYPTYFHPAKDADVFLWQDRMRSLERPWLFSFAGAPRPGDPMSIRGQLIDQCRSSSVCKLLECDLGESKCHSPSTVMKMFQSSLFC LQPQGDSYTRRSAFDSMLAGCIPVFFHPGSAYVQYTWHLPKNYTRYSVFIPEDDIRTRNASIEERLKS |
Full Sequence |
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Protein Sequence Length: 390 Download |
MKQYECMTKD SSIAAAVFVP FYAGFDIARY LWGYNISTRD AASLDLVDWL MKKPEWNVMG 60 GRDHFLVAGR ITWDFRRLTE EESDWGSKLL FLPAAKNMSM LVVESSPWNS NDFGIPYPTY 120 FHPAKDADVF LWQDRMRSLE RPWLFSFAGA PRPGDPMSIR GQLIDQCRSS SVCKLLECDL 180 GESKCHSPST VMKMFQSSLF CLQPQGDSYT RRSAFDSMLA GCIPVFFHPG SAYVQYTWHL 240 PKNYTRYSVF IPEDDIRTRN ASIEERLKSF HPDVVKNMRE EVINLIPRVI YADPRSKLET 300 LKDAFDVSIE AIINKVTKLR RDIIAGHEDK DFIEENSWKY SLLEDGQHTI GPHEWDPFFS 360 KPKEKGGDSS SSSAEAAKNS WKSEQRGQN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 6.0e-61 | 1 | 270 | 286 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC74507.1 | 0 | 1 | 389 | 216 | 604 | hypothetical protein OsI_09988 [Oryza sativa Indica Group] |
RefSeq | NP_001048945.1 | 0 | 1 | 389 | 216 | 604 | Os03g0144800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147481.1 | 0 | 1 | 389 | 215 | 603 | xyloglucan galactosyltransferase KATAMARI 1 [Zea mays] |
Swiss-Prot | Q8H038 | 0 | 1 | 389 | 200 | 588 | KATAM_ORYSJ RecName: Full=Xyloglucan galactosyltransferase KATAMARI1 homolog |
RefSeq | XP_002468517.1 | 0 | 1 | 389 | 211 | 599 | hypothetical protein SORBIDRAFT_01g047270 [Sorghum bicolor] |