Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si036641m |
Family | CE8 |
Protein Properties | Length: 323 Molecular Weight: 35830.6 Isoelectric Point: 8.1637 |
Chromosome | Chromosome/Scaffold: 9 Start: 21360048 End: 21362686 |
Description | pectin methylesterase 31 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 19 | 302 | 0 |
GEAFPTVQAAVDAVPLGNRARVVIRLAPGVYREPVYVAKTKNFITIAGAAPEGTVISWDNTATRIKHSQSSRVIGTGTFGCGTFIVEGEDFIAENITFEN SAPQGSGQAVAVRVTADRCAFYNCRFLGWQDTLYLHYGKQYLRDCYIEGHCDFIFGNSIALMEHCHIHCKAAGYITAHSRKSTSESTGYVFLRCIITGNG EAGYMFLGRPWGPFGRVVFAHTFMDRCIKPSGWHNWDKSENERTACFYEYRCSGPGSRSSNRVAWCRQLLDVEAEQFLSHTFID |
Full Sequence |
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Protein Sequence Length: 323 Download |
MAQQARRVLQ VAPPGKGDGE AFPTVQAAVD AVPLGNRARV VIRLAPGVYR EPVYVAKTKN 60 FITIAGAAPE GTVISWDNTA TRIKHSQSSR VIGTGTFGCG TFIVEGEDFI AENITFENSA 120 PQGSGQAVAV RVTADRCAFY NCRFLGWQDT LYLHYGKQYL RDCYIEGHCD FIFGNSIALM 180 EHCHIHCKAA GYITAHSRKS TSESTGYVFL RCIITGNGEA GYMFLGRPWG PFGRVVFAHT 240 FMDRCIKPSG WHNWDKSENE RTACFYEYRC SGPGSRSSNR VAWCRQLLDV EAEQFLSHTF 300 IDPDLDRPWL RQMMATRVPA SA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01095 | Pectinesterase | 5.0e-82 | 11 | 304 | 310 | + Pectinesterase. | ||
PLN02665 | PLN02665 | 2.0e-90 | 2 | 302 | 309 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 1.0e-91 | 8 | 311 | 306 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 2.0e-104 | 14 | 311 | 305 | + pectinesterase family protein | ||
PLN02773 | PLN02773 | 0 | 3 | 322 | 320 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY78435.1 | 0 | 3 | 322 | 4 | 336 | hypothetical protein OsI_33526 [Oryza sativa Indica Group] |
RefSeq | NP_001064567.1 | 0 | 3 | 322 | 4 | 336 | Os10g0407000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151351.1 | 0 | 1 | 322 | 1 | 324 | pectinesterase-1 [Zea mays] |
RefSeq | XP_002283941.1 | 0 | 5 | 322 | 2 | 316 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002464636.1 | 0 | 1 | 322 | 57 | 381 | hypothetical protein SORBIDRAFT_01g022290 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 11 | 301 | 11 | 302 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2.99878e-43 | 11 | 283 | 7 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 2e-27 | 2 | 304 | 28 | 360 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 1e-25 | 11 | 295 | 7 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 1e-25 | 11 | 295 | 7 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV024939 | 256 | 1 | 254 | 0 |
DR793150 | 247 | 1 | 245 | 0 |
GR994392 | 311 | 2 | 312 | 0 |
DV032205 | 250 | 1 | 248 | 0 |
HO303328 | 227 | 82 | 308 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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