Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si037764m |
Family | CBM43 |
Protein Properties | Length: 173 Molecular Weight: 17417.8 Isoelectric Point: 4.8886 |
Chromosome | Chromosome/Scaffold: 9 Start: 5258006 End: 5260069 |
Description | plasmodesmata callose-binding protein 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 26 | 107 | 8.2e-33 |
WCVCRPELGDSALQKTLDYACGDGADCKPILQNGPCFAPDTVRAHCSYAVNSFYQRNNQNAQACVFSGTATLVSTDPSGNGC |
Full Sequence |
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Protein Sequence Length: 173 Download |
MADAARLFLL LVAVAAALAG RSDGAWCVCR PELGDSALQK TLDYACGDGA DCKPILQNGP 60 CFAPDTVRAH CSYAVNSFYQ RNNQNAQACV FSGTATLVST DPSGNGCTYP ATPSAAGTSN 120 GGSPGVYSPP TMGMGPSALN DNSGANVLPV AGVAARLVIL AFCSLMALYL CA* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-20 | 26 | 96 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-35 | 26 | 109 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM47584.1 | 0 | 1 | 170 | 1 | 155 | putative expressed protein [Sorghum bicolor] |
GenBank | ACG25806.1 | 0 | 1 | 168 | 1 | 167 | glucan endo-1,3-beta-glucosidase 3 precursor [Zea mays] |
RefSeq | NP_001051316.1 | 0 | 1 | 168 | 1 | 172 | Os03g0756300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001152290.1 | 0 | 1 | 168 | 1 | 168 | glucan endo-1,3-beta-glucosidase 3 [Zea mays] |
RefSeq | XP_002463859.1 | 0 | 1 | 170 | 1 | 166 | hypothetical protein SORBIDRAFT_01g007670 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-22 | 21 | 111 | 8 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |