Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si038964m |
Family | GT47 |
Protein Properties | Length: 538 Molecular Weight: 59701 Isoelectric Point: 8.4665 |
Chromosome | Chromosome/Scaffold: 9 Start: 17604044 End: 17605657 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 138 | 480 | 0 |
CAGRYIYMYELPPRFNDDLVRDCKKLWRFYDMCPLLANSGMGRPLGDEGGVFSPHGWYATNQFTLDLIFHVRMKGYDCLTGDPSLAAAVYVPFYASLDGG RHMWNSTSLRDALGVDLVAWLAERPPWRAMGGRDHFMVAGRTAWDFRRYDDVDEQWGTKLLNFPAVQNMTVLVLETSPWRRANFAVPYPTYFHPEAAADV AAWQEKVRGAERTWLFAFAGAPHPWQRETVRPQIFQQCGASSRCKLFRCSGKGDANSCKSPGAVMRVFEISKFCLQPRGDSLTRRSMFDAILAGCIPVFF HPGSAYTQYTLHLPKEPSSWSVLIMHTEVSERNVSIEERLSKI |
Full Sequence |
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Protein Sequence Length: 538 Download |
MASQIQTDEA TKLTTSFEVN LQKDAEGAAG KHSGGGGVLR PSRICHLAIL STAFWAFVFF 60 LHYSSTQGDG GGVASVLFKQ AAFSLPPLLS GNTADRGRTP PEQPPPPSAL SVQARSPPAV 120 EAAAHLDRSA TAPPGDRCAG RYIYMYELPP RFNDDLVRDC KKLWRFYDMC PLLANSGMGR 180 PLGDEGGVFS PHGWYATNQF TLDLIFHVRM KGYDCLTGDP SLAAAVYVPF YASLDGGRHM 240 WNSTSLRDAL GVDLVAWLAE RPPWRAMGGR DHFMVAGRTA WDFRRYDDVD EQWGTKLLNF 300 PAVQNMTVLV LETSPWRRAN FAVPYPTYFH PEAAADVAAW QEKVRGAERT WLFAFAGAPH 360 PWQRETVRPQ IFQQCGASSR CKLFRCSGKG DANSCKSPGA VMRVFEISKF CLQPRGDSLT 420 RRSMFDAILA GCIPVFFHPG SAYTQYTLHL PKEPSSWSVL IMHTEVSERN VSIEERLSKI 480 PPETVKAMRE EVIRLIPRVV YADPTSRRVD FKDAFDVAVE AVIDRVAKRR RGDADAR* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-63 | 137 | 480 | 359 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC74507.1 | 0 | 36 | 531 | 21 | 536 | hypothetical protein OsI_09988 [Oryza sativa Indica Group] |
RefSeq | NP_001048945.1 | 0 | 36 | 531 | 21 | 536 | Os03g0144800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001150032.1 | 0 | 136 | 532 | 56 | 456 | xyloglucan galactosyltransferase KATAMARI 1 [Zea mays] |
Swiss-Prot | Q8H038 | 0 | 36 | 531 | 5 | 520 | KATAM_ORYSJ RecName: Full=Xyloglucan galactosyltransferase KATAMARI1 homolog |
RefSeq | XP_002464524.1 | 0 | 12 | 537 | 2 | 489 | hypothetical protein SORBIDRAFT_01g020080 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EL456596 | 272 | 183 | 453 | 0 |
EE075461 | 255 | 243 | 497 | 0 |
JG636298 | 266 | 209 | 473 | 0 |
CX076275 | 262 | 213 | 473 | 0 |
CF668912 | 273 | 251 | 523 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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