| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si039329m |
| Family | GH5 |
| Protein Properties | Length: 493 Molecular Weight: 54710.5 Isoelectric Point: 4.968 |
| Chromosome | Chromosome/Scaffold: 9 Start: 22784816 End: 22789803 |
| Description | |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH5 | 213 | 475 | 2.29995e-41 |
| RSHWDTFITEDDFKFIALSGLNAVRIPVGWWIASDPNPPLPFVGGSLQALDNAFRWARNYNIGVIVDLHAAPGSQNPYDHSATRDGSQEWGTTDANIAQT VQVIEFLVSRYANNTALLAVELLNEPLTKYYQDGYNAVRRYTPTAYVIMSNRLQIADQKELLQFASGFPGAVLDVHYYNLFDSKFENLTVEQNIDFVRNN RSADLATITNQNGRPLTFVGEWSAAWGVQGANPTDYQRFARVQQDVYGNATFGWAYWTLQNVN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 493 Download |
| MGSVALLLLV CSSWLVSMAA AAPGPPIRAV NLGGWLVTEG WIMPSLFDNI PNKDLLDGTQ 60 LQIKSTTQNR YLVVDQGGAS AILADRIQAS SWETFRLWRI NETTFNFRVY GGQFWGVDSN 120 GALVATATTP GPSETFQIVR RDSDKTRVRI RAPTGLFLQA KTMASVTADR AGEYTDWSDN 180 DPSVFLVNNV GNLYGEYQIC NGCGIARATQ VLRSHWDTFI TEDDFKFIAL SGLNAVRIPV 240 GWWIASDPNP PLPFVGGSLQ ALDNAFRWAR NYNIGVIVDL HAAPGSQNPY DHSATRDGSQ 300 EWGTTDANIA QTVQVIEFLV SRYANNTALL AVELLNEPLT KYYQDGYNAV RRYTPTAYVI 360 MSNRLQIADQ KELLQFASGF PGAVLDVHYY NLFDSKFENL TVEQNIDFVR NNRSADLATI 420 TNQNGRPLTF VGEWSAAWGV QGANPTDYQR FARVQQDVYG NATFGWAYWT LQNVNAVWNM 480 TFMIQNGIIT LK* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00257 | Fascin | 0.009 | 66 | 136 | 72 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| cd00257 | Fascin | 1.0e-6 | 68 | 177 | 112 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 1.0e-12 | 214 | 471 | 272 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 3.0e-27 | 174 | 470 | 339 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030674 | protein binding, bridging |
| GO:0051015 | actin filament binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEE50844.1 | 0 | 23 | 491 | 420 | 894 | hypothetical protein OsJ_31274 [Oryza sativa Japonica Group] |
| GenBank | EEE50844.1 | 0 | 25 | 492 | 902 | 1377 | hypothetical protein OsJ_31274 [Oryza sativa Japonica Group] |
| RefSeq | NP_001064458.1 | 0 | 11 | 492 | 13 | 509 | Os10g0370500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002438127.1 | 0 | 30 | 492 | 1 | 453 | hypothetical protein SORBIDRAFT_10g008480 [Sorghum bicolor] |
| RefSeq | XP_002464704.1 | 0 | 22 | 492 | 38 | 515 | hypothetical protein SORBIDRAFT_01g024390 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1eqp_A | 2e-32 | 196 | 489 | 45 | 378 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 1eqc_A | 4e-32 | 196 | 489 | 45 | 378 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 1cz1_A | 4e-32 | 196 | 489 | 45 | 378 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |
