Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si040033m |
Family | GH3 |
Protein Properties | Length: 638 Molecular Weight: 69610 Isoelectric Point: 9.0905 |
Chromosome | Chromosome/Scaffold: 9 Start: 5533872 End: 5535984 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 109 | 344 | 0 |
LKTRLGIPIIYGIDAVHGNNNVYNATIFPHNIGLGATRDPTLVKRIGEATAHEARATGIPYTFAPCVAVCRDPRWGRCYESYSEDTRLVQLMTSNMVTGL QGDVPANHPKGVPFVGGSKKVAGCAKHFVGDGGTQRGINENNTVLSFHDLMRIHMPPYDNAVIKGISTVMISYSSFNGVKMHENKNLITDTLKNKMNFRG FVITDWQAVDRITNPPHQHYYHSIQETIHAGIDMVM |
Full Sequence |
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Protein Sequence Length: 638 Download |
MARSPAATAV ACLLVAAVFL TTAAAGAEYV KYKDPKQPIN ERVQDLLSRM TLEEKIGQMS 60 QIERANATTE VIEKYFIGSV LSGGGSVPAE KATASVWQKM ITAMQKAALK TRLGIPIIYG 120 IDAVHGNNNV YNATIFPHNI GLGATRDPTL VKRIGEATAH EARATGIPYT FAPCVAVCRD 180 PRWGRCYESY SEDTRLVQLM TSNMVTGLQG DVPANHPKGV PFVGGSKKVA GCAKHFVGDG 240 GTQRGINENN TVLSFHDLMR IHMPPYDNAV IKGISTVMIS YSSFNGVKMH ENKNLITDTL 300 KNKMNFRGFV ITDWQAVDRI TNPPHQHYYH SIQETIHAGI DMVMIPYDYP EFVADLVKQV 360 KQGQIRLDRV NDAVSRILRV KFTMGLFEDP LPDPRLHKEL GAQEHRAIAR EAVRKSLVLL 420 KNGKKGDKQA MLPLSKKAKK ILVAGSHAHD LGNQCGGWTI KRQGESGNNL TGVGTTILEA 480 IKKAVSKNTT VDFVERPDKD DLAKSAGDYE YAVVAVGEPP YAETAGDNQN LTIPAPGPEV 540 IKDVCGLVKC VVLLVSGRPL VVQPYVDYMD ALVAAWLPGT EGQGVSDVLF GDYGFTGKLP 600 RTWFKTVDQL PMNYGDKRYD PLFPFGYGIT TKAAGHK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 1.0e-39 | 38 | 630 | 660 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-49 | 417 | 630 | 230 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 5.0e-87 | 35 | 630 | 670 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 4.0e-88 | 51 | 380 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 3.0e-92 | 50 | 486 | 447 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY91867.1 | 0 | 25 | 632 | 26 | 631 | hypothetical protein OsI_13514 [Oryza sativa Indica Group] |
RefSeq | NP_001051274.1 | 0 | 25 | 632 | 33 | 638 | Os03g0749100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001105671.1 | 0 | 25 | 634 | 20 | 629 | beta-glucanase [Zea mays] |
RefSeq | NP_001130296.1 | 0 | 18 | 632 | 13 | 619 | exoglucanase1 [Zea mays] |
RefSeq | XP_002466456.1 | 0 | 1 | 637 | 1 | 636 | hypothetical protein SORBIDRAFT_01g008050 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 28 | 633 | 1 | 601 | A Chain A, Structure Of The Wall Teichoic Acid Polymerase Tagf, H548a |
PDB | 1iex_A | 0 | 28 | 633 | 1 | 601 | A Chain A, Structure Of The Wall Teichoic Acid Polymerase Tagf, H548a |
PDB | 1iew_A | 0 | 28 | 633 | 1 | 601 | A Chain A, Structure Of The Wall Teichoic Acid Polymerase Tagf, H548a |
PDB | 1iev_A | 0 | 28 | 633 | 1 | 601 | A Chain A, Structure Of The Wall Teichoic Acid Polymerase Tagf, H548a |
PDB | 1ieq_A | 0 | 28 | 633 | 1 | 601 | A Chain A, Structure Of The Wall Teichoic Acid Polymerase Tagf, H548a |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |