| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si040154m |
| Family | CE8 |
| Protein Properties | Length: 586 Molecular Weight: 63255.6 Isoelectric Point: 6.7334 |
| Chromosome | Chromosome/Scaffold: 9 Start: 43327536 End: 43329374 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 263 | 563 | 0 |
| NVTVAKDGSGDFASISAALDAMPNKYTGRYFIYVKEGVYEETVNITNCRGNITMYGDGAKKSIVTGSKSVLDGIRMWRTATFAVDGDSFTAMRLGIRNTA GVEKQQALALRVKGDKAIFFNCRIEGNQDTLFAQAYRQFYRSCVISGTVDFIMGDAAAVFQRCVILVRQPRPGQPAVVTAHARRDHQQTTGFVIHRSQIV ADEQLAASNNRSGPAAAVKTYLGRPWKDFARTVVMESVIEGFVHGQGYMPWEGKENLGTAFFGEFANAGDGANVTGRKDMQGFHVMSKEKALQFTVGHFL H | |||
| Full Sequence |
|---|
| Protein Sequence Length: 586 Download |
| MSSSDGGQSR KRLVVGVISA CILIAMVVGT VAFFLTEKAE DDDRLSKRNL SKTTRTVELF 60 CAPADYQGTC RDTLERALSQ SADPAVYPHA AAAAAVTAVD RALEEGFNRS SVLDAVRQSN 120 DTLVWEAIHD CRMLLGTCRD NVERALASIA WRGVEGPVQD LQSWLSAVIT FQGSCVDMFP 180 KGEIRDEVKT AMEKAREISS NALAIIKQGA ALASMLDLHT DVDKGKGGGD GASRRLEEDV 240 VPAWVHREER ELIAAGKGGL TPNVTVAKDG SGDFASISAA LDAMPNKYTG RYFIYVKEGV 300 YEETVNITNC RGNITMYGDG AKKSIVTGSK SVLDGIRMWR TATFAVDGDS FTAMRLGIRN 360 TAGVEKQQAL ALRVKGDKAI FFNCRIEGNQ DTLFAQAYRQ FYRSCVISGT VDFIMGDAAA 420 VFQRCVILVR QPRPGQPAVV TAHARRDHQQ TTGFVIHRSQ IVADEQLAAS NNRSGPAAAV 480 KTYLGRPWKD FARTVVMESV IEGFVHGQGY MPWEGKENLG TAFFGEFANA GDGANVTGRK 540 DMQGFHVMSK EKALQFTVGH FLHGAEWIPE SGAPVSLGLA GGGEE* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02990 | PLN02990 | 4.0e-127 | 4 | 574 | 583 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 3.0e-127 | 8 | 579 | 575 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 1.0e-134 | 8 | 574 | 583 | + pectinesterase | ||
| pfam01095 | Pectinesterase | 5.0e-144 | 263 | 564 | 303 | + Pectinesterase. | ||
| PLN02745 | PLN02745 | 0 | 10 | 579 | 586 | + Putative pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAA89480.1 | 0 | 48 | 579 | 73 | 596 | pectin methylesterase [Salix gilgiana] |
| GenBank | EAY90351.1 | 0 | 38 | 582 | 38 | 603 | hypothetical protein OsI_11933 [Oryza sativa Indica Group] |
| RefSeq | NP_001050306.1 | 0 | 38 | 582 | 38 | 603 | Os03g0399000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002273499.1 | 0 | 47 | 579 | 72 | 596 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002467727.1 | 0 | 1 | 581 | 1 | 593 | hypothetical protein SORBIDRAFT_01g033140 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 262 | 579 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 263 | 579 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 2e-20 | 261 | 569 | 3 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 2e-20 | 261 | 569 | 3 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 2e-20 | 261 | 569 | 3 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
