Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si040241m |
Family | GT14 |
Protein Properties | Length: 417 Molecular Weight: 46443.4 Isoelectric Point: 10.5618 |
Chromosome | Chromosome/Scaffold: 9 Start: 19081769 End: 19084267 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 65 | 325 | 0 |
FAYLISASSGDAGRAARLLAALYHPANSYLLHLDREAPAEEHRRLAELVSGRGVYATAGNVWIVGRPNLVTYRGPTMLTTTLHAVALLLRLRRRWDWFVN LSASDYPLVTQDDMMEAFAGLPRDLNFIQHTSHLGWKIKKRARPVILDTALYEDGRAELLRPENISTNLRRFPTAFKLYTGSAWTMLSRPFAEYVTMGWD NLPRTLLLYHANIISSPEFYFQTVACNSRRFRNATVNHDLHFIRWDNPPKQHPLYLTARDY |
Full Sequence |
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Protein Sequence Length: 417 Download |
MGLGGGRREL LVSAAFTALL VASILLLPSL LLTGAGAGPK SWPFLSSLAA SDGAAGEAPR 60 YPVSFAYLIS ASSGDAGRAA RLLAALYHPA NSYLLHLDRE APAEEHRRLA ELVSGRGVYA 120 TAGNVWIVGR PNLVTYRGPT MLTTTLHAVA LLLRLRRRWD WFVNLSASDY PLVTQDDMME 180 AFAGLPRDLN FIQHTSHLGW KIKKRARPVI LDTALYEDGR AELLRPENIS TNLRRFPTAF 240 KLYTGSAWTM LSRPFAEYVT MGWDNLPRTL LLYHANIISS PEFYFQTVAC NSRRFRNATV 300 NHDLHFIRWD NPPKQHPLYL TARDYRRMLL SGVPFARKFR EGDPVLDRID RDILRRRDPG 360 QFAYGGWCSE GGAALCGNPQ EPGREGAVKA GAGSRRLKAL LRKALSPKNF RKQQCR* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 4.0e-60 | 65 | 329 | 269 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 4.0e-123 | 65 | 384 | 322 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33323.1 | 0 | 6 | 416 | 2 | 397 | secondary cell wall-related glycosyltransferase family 14 [Populus tremula x Populus tremuloides] |
GenBank | ACN36394.1 | 0 | 42 | 416 | 47 | 430 | unknown [Zea mays] |
RefSeq | NP_001064674.1 | 0 | 6 | 416 | 6 | 420 | Os10g0437000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002319193.1 | 0 | 6 | 416 | 2 | 363 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002467195.1 | 0 | 1 | 416 | 1 | 426 | hypothetical protein SORBIDRAFT_01g021260 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0000000007 | 81 | 309 | 101 | 319 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0000000007 | 81 | 309 | 101 | 319 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0000000007 | 81 | 309 | 101 | 319 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0000000007 | 81 | 309 | 101 | 319 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.000000002 | 81 | 309 | 101 | 319 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |