Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10000702m |
Family | CE8 |
Protein Properties | Length: 347 Molecular Weight: 38121.9 Isoelectric Point: 7.748 |
Chromosome | Chromosome/Scaffold: 15 Start: 335292 End: 337582 |
Description | pectinesterase 11 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 51 | 326 | 0 |
RVDQSGKGDFIKIQEAIESIPPNLNNSQLYFIWVKPGTYREKVVIPADKPYITLSGTQASNTILVWSDGEDILESPTLTIFGSDFVCRFLTIQNRFGTTG QAVALRVAADNAAFYGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHLHSLSPNNGSITAQMRSSASEKSGFTFLGCKLTGSGSTFLG RPWGAYSRVVFAYSFFSDVVAPQGWNEWGDSSKENTVYYGEYKCYGPGADRGPRVKWSKQLSYDEAAVFLSKDFIG |
Full Sequence |
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Protein Sequence Length: 347 Download |
MGVYKSKSKH NIANYYQIIV INIFILSSVT SSSMASSSLS SIDFSTAILI RVDQSGKGDF 60 IKIQEAIESI PPNLNNSQLY FIWVKPGTYR EKVVIPADKP YITLSGTQAS NTILVWSDGE 120 DILESPTLTI FGSDFVCRFL TIQNRFGTTG QAVALRVAAD NAAFYGCVIT SYQDTLLDDN 180 GNHYFKNCYI EGATDFICGS ASSLYERCHL HSLSPNNGSI TAQMRSSASE KSGFTFLGCK 240 LTGSGSTFLG RPWGAYSRVV FAYSFFSDVV APQGWNEWGD SSKENTVYYG EYKCYGPGAD 300 RGPRVKWSKQ LSYDEAAVFL SKDFIGGKDW LRPAPSHFKN APKPNP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02497 | PLN02497 | 4.0e-83 | 50 | 335 | 299 | + probable pectinesterase | ||
PLN02634 | PLN02634 | 2.0e-83 | 50 | 333 | 301 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 5.0e-87 | 49 | 336 | 300 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 1.0e-102 | 50 | 333 | 301 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 0 | 46 | 332 | 287 | + putative pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN79458.1 | 0 | 32 | 338 | 28 | 332 | hypothetical protein [Vitis vinifera] |
EMBL | CBI37658.1 | 0 | 32 | 338 | 46 | 350 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_179755.1 | 0 | 1 | 343 | 1 | 344 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002280496.1 | 0 | 44 | 338 | 1 | 293 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305435.1 | 0 | 32 | 339 | 9 | 315 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 50 | 332 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 52 | 332 | 7 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 0.000000000000006 | 47 | 335 | 6 | 342 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 0.000000000000006 | 47 | 335 | 6 | 342 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 0.000000000000007 | 47 | 335 | 6 | 342 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |