y
Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10000882m |
Family | GT47 |
Protein Properties | Length: 454 Molecular Weight: 52069 Isoelectric Point: 9.9525 |
Chromosome | Chromosome/Scaffold: 20 Start: 637531 End: 639245 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 67 | 376 | 0 |
KTRVYMYDLPTNFTYGLIEQHGVARGGEKSDDVTGLKYPGHQHMHEWYLFSDLNRPENERVGSPIVRVLDPAEADLFYVSAFSSLSLIVNSGRPGKSGSG YSDDDMEESLVGWLENQEWWRRNNGRDHVIVAEDPNALKRVMDRVKNAVLLVADFGRLTADQRSLVKDVIIPCSGRIDAYEGELGVKKRNTLLFFMRNRS RKDGGRVQDLLFKLLEKEDDVVIKHGTQSGENRRVAKQWMHTSKFCLHTDGDASSGCRLFDSIASLCIPVIVSDGIELPFEDVIDYRKFSVFLRSDVALK PGFLVKKLRK |
Full Sequence |
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Protein Sequence Length: 454 Download |
MKERLKPKIR KPRNLFSESK KVTVSLLSVF LLFIIVNTFF YPSFYSDSGS IRRNPVVSRE 60 NPGKSHKTRV YMYDLPTNFT YGLIEQHGVA RGGEKSDDVT GLKYPGHQHM HEWYLFSDLN 120 RPENERVGSP IVRVLDPAEA DLFYVSAFSS LSLIVNSGRP GKSGSGYSDD DMEESLVGWL 180 ENQEWWRRNN GRDHVIVAED PNALKRVMDR VKNAVLLVAD FGRLTADQRS LVKDVIIPCS 240 GRIDAYEGEL GVKKRNTLLF FMRNRSRKDG GRVQDLLFKL LEKEDDVVIK HGTQSGENRR 300 VAKQWMHTSK FCLHTDGDAS SGCRLFDSIA SLCIPVIVSD GIELPFEDVI DYRKFSVFLR 360 SDVALKPGFL VKKLRKVKPE KILKYQMAMK EVRRYFNYTH PNGSVNEIWR QVTQKVPLIK 420 LMINREKRMI KRESIEPQCS CLCSNQTRII HGV* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 8.0e-58 | 64 | 377 | 325 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN68074.1 | 0 | 20 | 449 | 8 | 457 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_199306.1 | 0 | 5 | 453 | 1 | 443 | ARAD2 (ARABINAN DEFICIENT 2); catalytic [Arabidopsis thaliana] |
RefSeq | NP_850241.1 | 0 | 67 | 453 | 59 | 447 | ARAD1 (ARABINAN DEFICIENT 1); catalytic/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002322391.1 | 0 | 20 | 447 | 10 | 451 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523645.1 | 0 | 20 | 450 | 10 | 449 | catalytic, putative [Ricinus communis] |