| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10001380m |
| Family | CE8 |
| Protein Properties | Length: 564 Molecular Weight: 61614.4 Isoelectric Point: 9.1193 |
| Chromosome | Chromosome/Scaffold: 22 Start: 1685177 End: 1688141 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 249 | 544 | 0 |
| VTVNQDGTGNFTTINAAVAAAPNKTDGTNGYFLIYVTAGLYEEYVEIPKYKRYVMMIGDGINQTVITGNRSVVDGWTTFNSATFILSGTNFIGVNITIRN TAGPTKGQAVALRSGGDFSVFYSCSFEAYQDTLYTHSLRQFYRECDVYGTVDFIFGNAAVVLQNCNLYPRQPRKGQSNEVTAQGRTDPNQNTGTAIHGCT IRPADDLVTSNYTVKTYLGRPWKEYSRTVVMQTYIDGFLEPTGWNAWTGDFALSTLYYAEYNNTGPGSNTTNRVTWPGYHVINATDASNFTVTNFL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 564 Download |
| MSQILMLLVT ISILSLSSSP SLAAEFQGTG NAMSRSNVCR FAPDPSYCRS VLPNQPGDIY 60 SYGRFSLRRS LSRATRFMSL IDDQLNRKGK VAAKATLGAL EDCKFLASQT IDFLLSSSRT 120 VDATKTLSFS RAEDVQTFLS AAITNEQTCL EGLKSTASEN GLSGDLFNDT KLYGVSLALF 180 SKGWVPRRKR SRPVWQPKGS FKKFLGFRNG RLPLNMTGRA RAVYNSVTTG PGRKLLQAEA 240 DAVLVSDIVT VNQDGTGNFT TINAAVAAAP NKTDGTNGYF LIYVTAGLYE EYVEIPKYKR 300 YVMMIGDGIN QTVITGNRSV VDGWTTFNSA TFILSGTNFI GVNITIRNTA GPTKGQAVAL 360 RSGGDFSVFY SCSFEAYQDT LYTHSLRQFY RECDVYGTVD FIFGNAAVVL QNCNLYPRQP 420 RKGQSNEVTA QGRTDPNQNT GTAIHGCTIR PADDLVTSNY TVKTYLGRPW KEYSRTVVMQ 480 TYIDGFLEPT GWNAWTGDFA LSTLYYAEYN NTGPGSNTTN RVTWPGYHVI NATDASNFTV 540 TNFLVGEGWI GQTGVPFVGG LIA* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02416 | PLN02416 | 1.0e-149 | 34 | 561 | 535 | + probable pectinesterase/pectinesterase inhibitor |
| PLN02301 | PLN02301 | 1.0e-149 | 67 | 561 | 499 | + pectinesterase/pectinesterase inhibitor |
| PLN02713 | PLN02713 | 0 | 30 | 563 | 540 | + Probable pectinesterase/pectinesterase inhibitor |
| PLN03043 | PLN03043 | 0 | 34 | 562 | 545 | + Probable pectinesterase/pectinesterase inhibitor; Provisional |
| pfam01095 | Pectinesterase | 0 | 249 | 547 | 300 | + Pectinesterase. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK84428.1 | 0 | 1 | 563 | 1 | 562 | papillar cell-specific pectin methylesterase-like protein [Brassica napus] |
| DDBJ | BAF00855.1 | 0 | 1 | 563 | 1 | 579 | hypothetical protein [Arabidopsis thaliana] |
| RefSeq | NP_563662.1 | 0 | 1 | 563 | 1 | 579 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | NP_566103.1 | 0 | 1 | 563 | 1 | 560 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002523112.1 | 0 | 14 | 562 | 27 | 566 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 251 | 561 | 7 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 249 | 561 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 3uw0_A | 7e-19 | 259 | 419 | 44 | 221 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 3e-17 | 259 | 497 | 18 | 284 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 3e-17 | 259 | 497 | 18 | 284 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
